Register | Log in | FAQ      [?] 

Tag interaction [937 articles]

Recent papers classified by the tag interaction.
RIS BibTeX RTF/PDF
  • Estimating the size of the human interactome
    Proceedings of the National Academy of Sciences (12 May 2008), 0708078105.
    by Michael P Stumpf, Thomas Thorne, Eric de Silva, Ronald Stewart, Hyeong J An, Michael Lappe, Carsten Wiuf
    posted to genome-wide human interaction by zwang on 2008-05-16 02:19:46 as ** along with 20 people and 1 group tharris chrissp100 sanchezbuelna guhjy phoenixzxl tmmurali neils paolomarcatili mjoach xingxu Ema cabbagesofdoom balicea marck friendpine brianb roys Evangelia dragonrez bpcusack C. elegans / WormBase
  • A map of human protein interactions derived from co-expression of human mRNAs and their orthologs
    Mol Syst Biol, Vol. 4 (15 April 2008)
    by Arun K Ramani, Zhihua Li, Traver G Hart, Mark W Carlson, Daniel R Boutz, Edward M Marcotte
    posted to interaction ortholog protein rna by zwang on 2008-06-13 12:18:37 as ** along with 11 people and 2 groups kgutwin windman83 druvus jeremymiller tmmurali biomcgary phoenixzxl giovanni grahamc ardalby ptrobajo KeatingJClub OPIG
  • Comparative genomics of the neglected human malaria parasite Plasmodium vivax
    Nature, Vol. 455, No. 7214. (October 2008), pp. 757-763.
    by Jane M Carlton, John H Adams, Joana C Silva, Shelby L Bidwell, Hernan Lorenzi, Elisabet Caler, Jonathan Crabtree, Samuel V Angiuoli, Emilio F Merino, Paolo Amedeo, Qin Cheng, Richard M Coulson, Brendan S Crabb, Del, Kobby Essien, Tamara V Feldblyum, Carmen Fernandez-Becerra, Paul R Gilson, Amy H Gueye, Xiang Guo, Simon Kang/'a, Taco W Kooij, Michael Korsinczky, Esmeralda V Meyer, Vish Nene, Ian Paulsen, Owen White, Stuart A Ralph, Qinghu Ren, Tobias J Sargeant, Steven L Salzberg, Christian J Stoeckert, Steven A Sullivan, Marcio M Yamamoto, Stephen L Hoffman, Jennifer R Wortman, Malcolm J Gardner, Mary R Galinski, John W Barnwell, Claire M Fraser-Liggett
    posted to protein motif interaction genome disease by zwang on 2008-10-17 02:51:34 as *** along with 4 people jbhiatt APRegier shung neils
  • In vitro analysis of DNA-protein interactions by proximity ligation.
    Proc Natl Acad Sci U S A, Vol. 104, No. 9. (27 February 2007), pp. 3067-3072.
    by SM Gustafsdottir, J Schlingemann, A Rada-Iglesias, E Schallmeiner, M Kamali-Moghaddam, C Wadelius, U Landegren
    posted to dna interaction protein by zwang on 2007-04-23 04:06:15 as ** along with 2 people and 1 group guhjy dpollard EisenLab
  • Constraints imposed by non-functional protein-protein interactions on gene expression and proteome size
    Mol Syst Biol, Vol. 4 (2008)
    by Jingshan Zhang, Sergei Maslov, Eugene I Shakhnovich
    posted to expression interaction protein by zwang on 2008-08-07 02:49:43 as ** along with 3 people grahamc Ema biehl
  • High-Quality Binary Protein Interaction Map of the Yeast Interactome Network
    Science (21 August 2008), 1158684.
    by Haiyuan Yu, Pascal Braun, Muhammed A Yildirim, Irma Lemmens, Kavitha Venkatesan, Julie Sahalie, Tomoko Hirozane-Kishikawa, Fana Gebreab, Na Li, Nicolas Simonis, Tong Hao, Jean-Francois Rual, Amelie Dricot, Alexei Vazquez, Ryan R Murray, Christophe Simon, Leah Tardivo, Stanley Tam, Nenad Svrzikapa, Changyu Fan, Anne-Sophie de Smet, Adriana Motyl, Michael E Hudson, Juyong Park, Xiaofeng Xin, Michael E Cusick, Troy Moore, Charlie Boone, Michael Snyder, Frederick P Roth, Albert-Laszlo Barabasi, Jan Tavernier, David E Hill, Marc Vidal
    posted to yeast protein network interaction by zwang on 2008-10-15 08:39:36 as **** along with 18 people and 1 group kintoki jbhiatt elenaz jfr ocs cerca ptrobajo carlk gracio reyez mdperry dullhunk Petersarkies grahamc yeastyboy guhjy maralena neils BenosLab
  • The role of disorder in interaction networks: a structural analysis
    Mol Syst Biol, Vol. 4 (25 March 2008)
    by Philip M Kim, Andrea Sboner, Yu Xia, Mark Gerstein
    posted to interaction network structure by zwang on 2008-03-27 05:09:26 as ** along with 5 people bootsy biomcgary maralena phoenixzxl chad_davis
  • Genome-Wide Mapping of in Vivo Protein-DNA Interactions
    Science (31 May 2007), 1141319.
    by David S Johnson, Ali Mortazavi, Richard M Myers, Barbara Wold
    posted to genome interaction protein rna by zwang on 2007-06-09 08:08:23 as **** along with 19 people and 5 groups jo_davies aalibes balicea andersbj JeremyZucker aswin kengg giovanni cjeans ghattem epigenetics biomcgary george_g cabbagezs Jporci blobbybirdman caseybrown emptyhb dquest Bioinformatics microRNA Marcotte_Lab UH - Computational Biology Myxo group
  • An exploration of alternative visualisations of the basic helix-loop-helix protein interaction network
    BMC Bioinformatics, Vol. 8 (06 August 2007), 289.
    by Brian J Holden, John W Pinney, Simon C Lovell, Grigoris D Amoutzias, David L Robertson
    posted to interaction network protein by zwang on 2007-08-09 02:05:35 as ** along with 2 people and 2 groups grahamc Tatelie ParkinsonLab_at_MaRS workshop
  • Computational design of antibody-affinity improvement beyond in vivo maturation.
    Nat Biotechnol (23 September 2007)
    by Shaun M M Lippow, K Dane D Wittrup, Bruce Tidor
    posted to design interaction invivo structure by zwang on 2007-10-11 16:58:25 as *** along with 2 people and 1 group dfgreen hmk group
  • Mutual information without the influence of phylogeny or entropy dramatically improves residue contact prediction
    Bioinformatics, Vol. 24, No. 3. (1 February 2008), pp. 333-340.
    by SD Dunn, LM Wahl, GB Gloor
    posted to contact interaction mi phylogeny prediction residue by zwang on 2008-05-09 02:44:06 as *** along with 3 people and 1 group bicko sobolevnrm marck baker-group
  • From E-MAPs to module maps: dissecting quantitative genetic interactions using physical interactions
    Mol Syst Biol, Vol. 4 (15 July 2008)
    by Igor Ulitsky, Tomer Shlomi, Martin Kupiec, Ron Shamir
    posted to genetic interaction module by zwang on 2008-07-22 06:55:53 as ** along with 2 people roys ptrobajo
  • Revealing static and dynamic modular architecture of the eukaryotic protein interaction network
    Mol Syst Biol, Vol. 3 (24 April 2007)
    by Kakajan Komurov, Michael White
    posted to eukaryota interaction network protein by zwang on 2007-04-24 17:07:07 as **** along with 8 people Borelli tomhebbron massivemayhem nicoleq mingzhi phoenixzxl ellakat carlk
  • The Origins of Specificity in Polyketide Synthase Protein Interactions
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e186.
    by Mukund Thattai, Yoram Burak, Boris I Shraiman
    posted to co-evolution interaction protein by zwang on 2007-11-02 08:09:28 as *** along with 2 people phoenixzxl marck
  • A comprehensive modular map of molecular interactions in RB/E2F pathway
    Mol Syst Biol, Vol. 4 (4 March 2008)
    by Laurence Calzone, Amelie Gelay, Andrei Zinovyev, Francois Radvanyl, Emmanuel Barillot
    posted to interaction pathway by zwang on 2008-03-06 04:31:27 as ** along with 2 people jfr thomaskelder
  • Predicting protein folding pathways at the mesoscopic level based on native interactions between secondary structure elements
    BMC Bioinformatics, Vol. 9 (23 July 2008), 320.
    by Qingwu Yang, Sing-Hoi Sze
    posted to folding interaction prediction protein structure by zwang on 2008-07-26 10:43:26 as *
  • Targeting and tinkering with interaction networks.
    Nature chemical biology, Vol. 4, No. 11. (20 October 2008), pp. 666-673.
    by Robert B B Russell, Patrick Aloy
    posted to network interaction by zwang on 2008-11-08 04:10:31 as ** along with 1 person chad_davis
  • Edge-based scoring and searching method for identifying condition-responsive protein-protein interaction sub-network.
    Bioinformatics (1 June 2007)
    by Zheng Guo, Yongjin Li, Xue Gong, Chen Yao, Wencai Ma, Dong Wang, Yanhui Li, Jing Zhu, Min Zhang, Da Yang, Jing Wang
    posted to interaction network protein by zwang on 2007-09-17 09:41:41 as ** along with 1 person and 1 group grahamc ParkinsonLab_at_MaRS
  • A Feature-Based Approach to Modeling Protein–DNA Interactions
    PLoS Comput Biol, Vol. 4, No. 8. (2008), e1000154.
    by Eilon Sharon, Shai Lubliner, Eran Segal
    posted to dna interaction protein by zwang on 2008-08-30 03:58:06 as ** along with 5 people ptrobajo dakelley Stew emptyhb aalibes
  • Dissecting direct reprogramming through integrative genomic analysis
    Nature (28 May 2008)
    by Tarjei S Mikkelsen, Jacob Hanna, Xiaolan Zhang, Manching Ku, Marius Wernig, Patrick Schorderet, Bradley E Bernstein, Rudolf Jaenisch, Eric S Lander, Alexander Meissner
    posted to genome-wide interaction by zwang on 2008-07-09 03:18:08 as ** along with 4 people jernst jasonflannick djkt inesdesantiago
  • An in Vivo Map of the Yeast Protein Interactome
    Science, Vol. 320, No. 5882. (13 June 2008), pp. 1465-1470.
    by Kirill Tarassov, Vincent Messier, Christian R Landry, Stevo Radinovic, Mercedes M Molina, Igor Shames, Yelena Malitskaya, Jackie Vogel, Howard Bussey, Stephen W Michnick
    posted to genome interaction protein yeast by zwang on 2008-06-27 03:58:03 as ** along with 5 people carlk thomaskelder Petersarkies renatomilani balicea
  • Phylogenetic tree information aids supervised learning for predicting protein-protein interaction based on distance matrices
    BMC Bioinformatics, Vol. 8 (09 January 2007), 6.
    by Roger A Craig, Li Liao
    posted to interaction phylogeny prediction protein by zwang on 2007-04-16 13:57:11 as *** along with 2 people marti iris_2001
  • Cooperative Gating and Spatial Organization of Membrane Proteins through Elastic Interactions
    PLoS Computational Biology, Vol. 3, No. 5. (1 May 2007), e81.
    by Tristan Ursell, Kerwyn C Huang, Eric Peterson, Rob Phillips
    posted to interaction membrane protein by zwang on 2007-05-26 04:54:34 as **
  • Deciphering Protein–Protein Interactions. Part II. Computational Methods to Predict Protein and Domain Interaction Partners
    PLoS Computational Biology, Vol. 3, No. 4. (1 April 2007), e43.
    by Benjamin A Shoemaker, Anna R Panchenko
    posted to domain interaction prediction protein by zwang on 2007-04-28 12:23:05 as *** along with 17 people zdai Robinder giovenko Yanno guhjy aalibes bicko jfr chad_davis cjeans iris_2001 lpfernandes groepl carlk Evangelia higueruelo phoenixzxl
  • Detection of heteromerization of more than two proteins by sequential BRET-FRET.
    Nature methods (29 June 2008)
    by Paulina Carriba, Gemma Navarro, Francisco Ciruela, Sergi Ferré, Vicent Casadó, Luigi Agnati, Antoni Cortés, Josefa Mallol, Kjell Fuxe, Enric I I Canela, Carmen Lluís, Rafael Franco
    posted to bret fluorescent fret interaction protein by zwang on 2008-08-11 03:59:34 as *** along with 1 person guhjy
  • Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map
    Nature (21 February 2007)
    by Sean R Collins, Kyle M Miller, Nancy L Maas, Assen Roguev, Jeffrey Fillingham, Clement S Chu, Maya Schuldiner, Marinella Gebbia, Judith Recht, Michael Shales, Huiming Ding, Hong Xu, Junhong Han, Kristin Ingvarsdottir, Benjamin Cheng, Brenda Andrews, Charles Boone, Shelley L Berger, Phil Hieter, Zhiguo Zhang, Grant W Brown, James C Ingles, Andrew Emili, David C Allis, David P Toczyski, Jonathan S Weissman, Jack F Greenblatt, Nevan J Krogan
    posted to complex genetic interaction protein yeast by zwang on 2007-10-22 08:49:41 as ** along with 2 people balajis chasmand
  • Structural insights into the interaction of the evolutionarily conserved ZPR1 domain tandem with eukaryotic EF1A, receptors, and SMN complexes
    Proceedings of the National Academy of Sciences, Vol. 104, No. 35. (28 August 2007), pp. 13930-13935.
    by Ashwini K Mishra, Laxman Gangwani, Roger J Davis, David G Lambright
    posted to complex domain eukaryota evolution interaction structure by zwang on 2007-11-01 02:01:47 as ***
  • Evolution at the system level: the natural history of protein interaction networks
    Trends in Ecology & Evolution, Vol. In Press, Corrected Proof
    by Michael P Stumpf, William P Kelly, Thomas Thorne, Carsten Wiuf
    posted to evolution interaction network protein system by zwang on 2007-05-08 11:43:31 as *** along with 4 people HugoMarcelo joepickrell cjeans chrys
  • Characterization of the steric defense of the HIV-1 gp41 N-trimer region
    Protein Sci, Vol. 17, No. 12. (1 December 2008), pp. 2091-2100.
    by Debra M Eckert, Yu Shi, Sunghwan Kim, Brett D Welch, Eunchai Kang, Emily S Poff, Michael S Kay
    posted to interaction hiv by zwang on 2008-12-19 08:43:40 as **
  • Interaction-Site Prediction for Protein Complexes: a Critical Assessment
    Bioinformatics (22 June 2007), btm323.
    by Huan-Xiang Zhou, Sanbo Qin
    posted to interaction prediction protein site by zwang on 2007-06-25 01:48:20 as **** along with 11 people timg phoenixzxl tjimenez bicko malcook cabbagezs niallhaslam carlescorbi marti higueruelo kintoki
  • InPrePPI: an integrated evaluation method based on genomic context for predicting protein-protein interactions in prokaryotic genomes
    BMC Bioinformatics, Vol. 8 (26 October 2007), 414.
    by Jingchun Sun, Yan Sun, Guohui Ding, Qi Liu, Chuan Wang, Youyu He, Tieliu Shi, Yixue Li, Zhongming Zhao
    posted to bacterial genome interaction prediction protein by zwang on 2007-10-29 13:11:19 as ** along with 2 people and 1 group tmmurali iris_2001 csb_journal_club_public
  • Protein ligand interaction database (PLID)
    Computational Biology and Chemistry, Vol. 32, No. 5. (October 2008), pp. 387-390.
    by Srinivas A Reddy, Durga HS Amarnath, Raju S Bapi, Madhavi G Sastry, Narahari G Sastry
    posted to interaction protein by zwang on 2008-08-30 03:52:42 as ** along with 1 person guhjy
  • Yeast surface display for protein engineering and characterization
    Current Opinion in Structural Biology, Vol. 17, No. 4. (August 2007), pp. 467-473.
    by Annie S Gai, Dane K Wittrup
    posted to interaction protein yeast ysd by zwang on 2007-09-30 11:33:01 as ***
  • An Evolutionary-Network Model Reveals Stratified Interactions in the V3 Loop of the HIV-1 Envelope
    PLoS Computational Biology, Vol. 3, No. 11. (1 November 2007), e231.
    by Art F Poon, Fraser I Lewis, Sergei L Pond, Simon D Frost
    posted to evolution interaction modeling network protein by zwang on 2007-12-10 04:40:29 as **** along with 1 person gokhan
  • Interaction networks for systems biology.
    FEBS Lett (15 February 2008)
    by Samuel Bader, Sebastian Kühner, Anne-Claude C Gavin
    posted to interaction network system by zwang on 2008-02-27 02:27:07 as *** along with 4 people yyby chad_davis ruvido adacier
  • Insights into Protein–DNA Interactions through Structure Network Analysis
    PLoS Comput Biol, Vol. 4, No. 9. (2008), e1000170.
    by R Sathyapriya, MS Vijayabaskar, Saraswathi Vishveshwara
    posted to structure protein interaction dna by zwang on 2008-09-06 04:04:30 as ** along with 7 people and 1 group Zephyrus Ema emptyhb aalibes AbnerCYH Totobox hmk Roswell Cancer Crosstalk
  • Protein-Protein Interactions in the Membrane: Sequence, Structural, and Biological Motifs
    Structure, Vol. 16, No. 7. (9 July 2008), pp. 991-1001.
    by David T Moore, Bryan W Berger, William F Degrado
    posted to interaction protein structure by zwang on 2008-07-14 02:46:16 as ** along with 1 person neils
  • Preferential protection of protein interaction network hubs in yeast: Evolved functionality of genetic redundancy
    Proceedings of the National Academy of Sciences (23 January 2008), 0711043105.
    by Ran Kafri, Orna Dahan, Jonathan Levy, Yitzhak Pilpel
    posted to genetic interaction network protein yeast by zwang on 2008-02-24 13:45:53 as *** along with 4 people and 1 group cjeans janek04 wsjames mclarenv Oxford Virology
  • An integrative approach for predicting interactions of protein regions
    Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. i35-41.
    by Sven-Eric Schelhorn, Thomas Lengauer, Mario Albrecht
    posted to domain interaction prediction protein by zwang on 2008-08-11 04:13:26 as **** along with 2 people neils kluck
  • Structural biology by NMR: structure, dynamics, and interactions.
    PLoS computational biology, Vol. 4, No. 9. (September 2008)
    by PR Markwick, T Malliavin, M Nilges
    posted to structure protein nmr interaction by zwang on 2008-10-07 11:18:32 as ** along with 7 people and 1 group betainverse bmduggan pengchy raik ruvido laurabailey barry structural_bioinformatics
  • Ubiquitination screen using protein microarrays for comprehensive identification of Rsp5 substrates in yeast
    Mol Syst Biol, Vol. 3 (5 June 2007)
    by Ronish Gupta, Bart Kus, Christopher Fladd, James Wasmuth, Raffi Tonikian, Sachdev Sidhu, Nevan J Krogan, John Parkinson, Daniela Rotin
    posted to interaction microarray protein yeast by zwang on 2007-06-06 01:20:33 as **
  • Structure-Templated Predictions of Novel Protein Interactions from Sequence Information
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e182.
    by Doron Betel, Kevin E Breitkreuz, Ruth Isserlin, Danielle Dewar-Darch, Mike Tyers, Christopher W Hogue
    posted to interaction prediction protein sequence structure by zwang on 2007-11-02 08:05:43 as *** along with 2 people bicko dquest
  • Unequal evolutionary conservation of human protein interactions in interologous networks
    Genome Biology, Vol. 8 (29 May 2007), R95.
    by Kevin R Brown, Igor Jurisica
    posted to evolution interaction network protein by zwang on 2007-06-05 09:43:50 as ** along with 3 people and 1 group diamantis grahamc winterschlaefer ParkinsonLab_at_MaRS
  • Where have all the interactions gone? Estimating the coverage of two-hybrid protein interaction maps
    PLoS Computational Biology, Vol. preprint, No. 2007. (1 September 2007), e214.eor.
    by Hailiang Huang, Bruno Jedynak, Joel S Bader
    posted to genome-wide interaction protein y2h yeast by zwang on 2007-10-22 05:10:19 as ** along with 1 person roys
  • Evolution of Function in the “Two Dinucleotide Binding Domains” Flavoproteins
    PLoS Computational Biology, Vol. 3, No. 7. (1 July 2007), e121.
    by Sunil Ojha, Elaine C Meng, Patricia C Babbitt
    posted to binding domain evolution interaction protein site by zwang on 2007-08-29 02:31:54 as *** along with 4 people and 2 groups pradiptaray barry Einat mdimon structural_bioinformatics Bioinformatics
  • Characterization of Protein Hubs by Inferring Interacting Motifs from Protein Interactions
    PLoS Computational Biology, Vol. preprint, No. 2007. (1 July 2007), e178.eor.
    by Ramon Aragues, Andrej Sali, Jaume Bonet, Marc Marti-Renom, Baldomero Oliva
    posted to hub interaction motif protein by zwang on 2007-08-09 02:37:44 as ***
  • Compensatory Evolution Reveals Functional Interactions between Ribosomal Proteins S12, L14 and L19
    Journal of Molecular Biology, Vol. 366, No. 1. (9 February 2007), pp. 207-215.
    by Sophie Maisnier-Patin, Wilhelm Paulander, Alexandra Pennhag, Dan I Andersson
    posted to compensatory evolution interaction by zwang on 2007-03-19 12:51:25 as **
  • Designed Protein-Protein Association
    Science, Vol. 319, No. 5860. (11 January 2008), pp. 206-209.
    by Dirk Grueninger, Nora Treiber, Mathias O Ziegler, Jochen W Koetter, Monika-Sarah Schulze, Georg E Schulz
    posted to interaction protein structure by zwang on 2008-01-17 04:23:36 as ** along with 5 people and 1 group cjeans cactus biomcgary sobolevnrm higueruelo baker-group
  • Genome-wide mapping of allele-specific protein-DNA interactions in human cells
    Nature Methods, Vol. 5, No. 4. (16 March 2008), pp. 307-309.
    by Nathaniel D Maynard, Jing Chen, Rhona K Stuart, Jian-Bing Fan, Bing Ren
    posted to dna genome-wide interaction protein by zwang on 2008-04-02 07:26:10 as ** along with 3 people eskay guhjy inesdesantiago
  • Using support vector machine combined with auto covariance to predict protein-protein interactions from protein sequences
    Nucl. Acids Res. (4 April 2008), gkn159.
    by Yanzhi Guo, Lezheng Yu, Zhining Wen, Menglong Li
    posted to interaction prediction protein svm by zwang on 2008-06-16 03:51:12 as **** along with 4 people guhjy marck phoenixzxl tmmurali
    • Note: You may cite this page as: http://www.citeulike.org/tag/interaction

    Result page: 1 2 3 4 5 6 7 8 9 10 Next RIS BibTeX RTF/PDF
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.