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Tag regulation [885 articles]

Recent papers classified by the tag regulation.
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  • Estimating dynamic models for gene regulation networks
    Bioinformatics (27 May 2008), btn246.
    by Jiguo Cao, Hongyu Zhao
    posted to dynamics gene modeling network regulation by zwang on 2008-06-03 04:00:45 as **
  • Potential Energy Landscape and Robustness of a Gene Regulatory Network: Toggle Switch
    PLoS Computational Biology, Vol. 3, No. 3. (1 March 2007), e60.
    by Keun-Young Kim, Jin Wang
    posted to gene network regulation by zwang on 2007-04-19 15:10:52 as **
  • Transcriptional Regulation by Competing Transcription Factor Modules
    PLoS Computational Biology, Vol. 2, No. 12. (1 December 2006), e164.
    by Rutger Hermsen, Sander Tans, Ten
    posted to regulation transcription by zwang on 2007-04-16 14:10:54 as * along with 3 people wnpx nirfriedman nklee
  • How gene order is influenced by the biophysics of transcription regulation
    PNAS (20 August 2007), 0700672104.
    by Grigory Kolesov, Zeba Wunderlich, Olga N Laikova, Mikhail S Gelfand, Leonid A Mirny
    posted to gene regulation transcription by zwang on 2007-08-27 09:01:56 as * along with 6 people madhadron margaritis Jporci maximilianh lambda jjray
  • Genetic reconstruction of a functional transcriptional regulatory network.
    Nat Genet (8 April 2007)
    by Zhanzhi Hu, Patrick J J Killion, Vishwanath R R Iyer
    posted to genetic network regulation transcription by zwang on 2007-04-29 08:57:29 as ** along with 13 people and 6 groups akraemer behindtherabbit ptrobajo dpollard xico nickluscombe lizabeth dejori xingxu naegele czeller mapplab siebert Bioinformatics EisenLab WetBiology EBI-regulation ic4 generif_paper
  • Structure of the Chloroplast Ribosome: Novel Domains for Translation Regulation
    PLoS Biology, Vol. 5, No. 8. (1 August 2007), e209.
    by Andrea L Manuell, Joel Quispe, Stephen P Mayfield
    posted to domain regulation structure translation by zwang on 2007-08-15 06:29:51 as *
  • Nonlinear differential equation model for quantification of transcriptional regulation applied to microarray data of Saccharomyces cerevisiae
    Nucleic Acids Research, Vol. 35, No. 1. (January 2007), pp. 279-287.
    by Vu, Tra Thi, Vohradsky, Jiri
    posted to microarray regulation transcription yeast by zwang on 2007-04-16 13:48:37 as ** along with 1 person lillo80
  • Ribozymes, riboswitches and beyond: regulation of gene expression without proteins
    Nature Reviews Genetics, Vol. 8, No. 10. (11 September 2007), pp. 776-790.
    by Alexander Serganov, Dinshaw J Patel
    posted to expression gene regulation ribozyme rna by zwang on 2007-11-01 07:15:05 as *** along with 4 people and 3 groups dbikard jmrivort austin grahamc G-quadruplex Supramolecular SynBioSys
  • Orthologous Transcription Factors in Bacteria Have Different Functions and Regulate Different Genes
    PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e175.
    by Morgan N Price, Paramvir S Dehal, Adam P Arkin
    posted to bacterial gene ortholog regulation transcription by zwang on 2007-11-02 08:03:07 as ** along with 10 people and 3 groups druvus treangen carlk operon dpollard dquest djkt cabbagezs heliopais blobbybirdman EisenLab cis-regulatory-evolution Myxo group
  • Gene Regulation by Transcription Factors and MicroRNAs
    Science, Vol. 319, No. 5871. (28 March 2008), pp. 1785-1786.
    by Oliver Hobert
    posted to microrna regulation transcription by zwang on 2008-04-07 15:58:07 as ** along with 11 people and 1 group valeriehilgers guhjy inesdesantiago jfr ealloza biomcgary heliopais emptyhb maralena bootsy siebert microRNA
  • Regulatory networks define phenotypic classes of human stem cell lines
    Nature (24 August 2008)
    by Franz-Josef Müller, Louise C Laurent, Dennis Kostka, Igor Ulitsky, Roy Williams, Christina Lu, In-Hyun Park, Mahendra S Rao, Ron Shamir, Philip H Schwartz, Nils O Schmidt, Jeanne F Loring
    posted to regulation network microarray expression clustering by zwang on 2008-10-16 14:00:26 as ** along with 9 people and 1 group guhjy jfr ajaymalik ptrobajo heliopais wsjames roys tmmurali caseybrown Oxford Virology
  • Genome-wide analyses reveal properties of redundant and specific promoter occupancy within the ETS gene family
    Genes Dev., Vol. 21, No. 15. (1 August 2007), pp. 1882-1894.
    by Peter C Hollenhorst, Atul A Shah, Christopher Hopkins, Barbara J Graves
    posted to genefamily genome-wide motif promoter regulation by zwang on 2007-08-09 02:28:24 as * along with 2 people sbranco ale
  • Transcription Factor Substitution during the Evolution of Fungal Ribosome Regulation
    Molecular Cell, Vol. 29, No. 5. (14 March 2008), pp. 552-562.
    by Herve Hogues, Hugo Lavoie, Adnane Sellam, Maria Mangos, Terry Roemer, Enrico Purisima, Andre Nantel, Malcolm Whiteway
    posted to evolution regulation substitution transcription by zwang on 2008-03-20 13:26:22 as ** along with 1 person and 1 group stajich Berkeley Mycology
  • A genome-scale computational study of the interplay between transcriptional regulation and metabolism
    Mol Syst Biol, Vol. 3 (17 April 2007)
    by Tomer Shlomi, Yariv Eisenberg, Roded Sharan, Eytan Ruppin
    posted to genome-wide regulation transcription by zwang on 2007-04-17 17:25:33 as ** along with 1 person dylan77
  • Lifespan Regulation by Evolutionarily Conserved Genes Essential for Viability.
    PLoS Genet, Vol. 3, No. 4. (6 April 2007)
    by Sean P P Curran, Gary Ruvkun
    posted to evolution gene regulation viability by zwang on 2007-04-29 05:08:51 as ** along with 4 people and 2 groups Zephyrus pradiptaray tharris johncumbers R.E.A.D C. elegans / WormBase
  • Toward Understanding the Endocrine Regulation of Gonadal Somatic Cells
    Endocrinology, Vol. 147, No. 8. (1 August 2006), pp. 3662-3665.
    by Matti Poutanen
    posted to somatic regulation gonadal endocrine cells by Zephyrus on 2008-11-30 21:41:36 as **
  • Biological principles of microRNA-mediated regulation: shared themes amid diversity
    Nature Reviews Genetics, Vol. 9, No. 11., pp. 831-842.
    by Alex S Flynt, Eric C Lai
    posted to regulation microrna diversity cancer-crosstalk cancer by Zephyrus on 2008-10-27 05:17:54 as ** along with 11 people and 4 groups valeriehilgers guhjy dakelley heliopais giovenko natstreet druvus stajich ealloza dchughes pengchy microRNA database Roswell Cancer Crosstalk microRNA Berkeley Mycology
  • MicroRNAs: new regulators of immune cell development and function
    Nat Immunol, Vol. 9, No. 8. (2008), pp. 839-845.
    by David Baltimore, Mark P Boldin, Ryan M O'Connell, Dinesh S Rao, Konstantin D Taganov
    posted to thesis regulation microrna immunology development confounder by Zephyrus on 2008-09-11 16:25:08 as ** along with 4 people and 1 group valeriehilgers huiminC heliopais oelemento microRNA
  • Sex-Specific Variability in the Immune System across Life-History Stages.
    The American Naturalist, Vol. 172, No. 3. (2008), pp. E99-E112.
    by Oliver P Love, Katrina G Salvante, James Dale, Tony D Williams
    posted to regulation read lifespan life-history immunity evolution by Zephyrus on 2008-11-23 18:46:04 as ** along with 1 group R.E.A.D
  • Developmental and epigenetic regulation of the human TLR3 gene
    Molecular Immunology, Vol. 46, No. 1. (November 2008), pp. 27-36.
    by A Porras, S Kozar, V Russanova, P Salpea, T Hirai, N Sammons, P Mittal, J Kim, K Ozato, R Romero
    posted to regulation read genetics evolution epigenetics development by Zephyrus on 2008-11-13 22:49:21 as **
  • Genistein, Estrogen Receptors, and the Acquired Immune Response
    J. Nutr., Vol. 136, No. 3. (1 March 2006), pp. 704-708.
    by Paul S Cooke, Vimal Selvaraj, Srikanth Yellayi
    posted to estrogen regulation receptor phytoestrogen immunomodulation genistein by Zephyrus on 2008-11-06 10:47:31 as **
  • Microenvironmental regulation of cancer development
    Current Opinion in Genetics & Development, Vol. 18, No. 1. (February 2008), pp. 27-34.
    by M Hu, K Polyak
    posted to thesis regulation microenvironment development cancer background by Zephyrus on 2008-11-29 01:09:22 as ** along with 1 person shikin
  • Neuroendocrine regulation of autoimmune/inflammatory disease
    J Endocrinol, Vol. 169, No. 3. (1 June 2001), pp. 429-435.
    by EM Sternberg
    posted to thesis regulation neuroendocrine inflammation hormone estrogen autoimmune by Zephyrus on 2008-10-16 18:02:09 as **
  • notes Regulating inflammation: The ying and yang of NF-[kappa]B activation
    Immunol Cell Biol, Vol. 86, No. 4. (April 2008), pp. 299-300.
    by Shane T Grey
    posted to nf-kappab regulation inflammation immunology by Zephyrus on 2008-09-12 03:12:28 as **
  • Prolactin, immunoregulation, and autoimmune diseases
    Seminars in Arthritis and Rheumatism, Vol. 20, No. 5. (April 1991), pp. 273-284.
    by L Jara
    posted to thesis regulation prolactin hormone autoimmune by Zephyrus on 2008-10-17 03:29:40 as **
  • Cytochrome c oxidase biogenesis: new levels of regulation.
    IUBMB life, Vol. 60, No. 9. (September 2008), pp. 557-568.
    by F Fontanesi, IC Soto, A Barrientos
    posted to regulation oxidase cytochrome c biosynthesis by Zephyrus on 2009-01-07 09:35:28 as **
  • Immune cell regulators in mouse mammary development and involution.
    Journal of animal science (10 October 2008)
    by C J J Watson
    posted to thesis regulation mice immune cancer breast by Zephyrus on 2008-10-16 20:21:24 as ** along with 1 group Breast Cancer Reading Club
  • Prolactin inducible protein in cancer, fertility and immunoregulation: structure, function and its clinical implications.
    Cellular and molecular life sciences : CMLS (16 October 2008)
    by Md I Hassan, A Waheed, S Yadav, T P Singh, F Ahmad
    posted to thesis regulation prolactin immune fertility cancer breast by Zephyrus on 2008-10-17 03:44:13 as **
  • Estrogen regulation of testicular function.
    Reproductive biology and endocrinology : RB&E, Vol. 3 (2005)
    by BT Akingbemi
    posted to xenoestrogen testicle regulation estrogen by Zephyrus on 2008-11-30 17:10:12 as **
  • Chemokines and leukocyte traffic
    Nature Immunology, Vol. 9, No. 9. (19 August 2008), pp. 949-952.
    by Federica Sallusto, Marco Baggiolini
    posted to traffic regulation immunology confounder chemokines by Zephyrus on 2008-09-12 04:48:48 as **
  • Alternative isoform regulation in human tissue transcriptomes
    Nature (02 November 2008)
    by Eric T Wang, Rickard Sandberg, Shujun Luo, Irina Khrebtukova, Lu Zhang, Christine Mayr, Stephen F Kingsmore, Gary P Schroth, Christopher B Burge
    posted to transcription tissue review regulation isoform gene-expression cancer-crosstalk by Zephyrus on 2008-12-25 15:01:58 as ** along with 9 people and 1 group gjuggler bertelsen eluinka gfliustu vplagnol kieran101 emptyhb rschulz abizar Roswell Cancer Crosstalk
  • The Antisense Transcriptomes of Human Cells
    Science (4 December 2008), 1163853.
    by Yiping He, Bert Vogelstein, Victor E Velculescu, Nickolas Papadopoulos, Kenneth W Kinzler
    posted to transcription sense review regulation gene-expression anti-sense by Zephyrus on 2008-12-25 14:56:56 as ** along with 11 people and 2 groups inesdesantiago skoch3 djkt strands balicea shikin coela ealloza diaz0058 gfliustu jbhiatt Koch_Lab Roswell Cancer Crosstalk
  • Chromatin context dominates estrogen regulation of pS2 gene expression
    Experimental Cell Research, Vol. 314, No. 15. (10 September 2008), pp. 2796-2810.
    by A Oduro, M Fritsch, F Murdoch
    posted to regulation estrogen effects chromatin by Zephyrus on 2008-11-29 00:57:59 as **
  • Gene Regulation in Primates Evolves under Tissue-Specific Selection Pressures
    PLoS Genet, Vol. 4, No. 11. (21 November 2008), e1000271.
    by Ran Blekhman, Alicia Oshlack, Adrien E Chabot, Gordon K Smyth, Yoav Gilad
    posted to tissue selection regulation read heterogeneity evolution cancer by Zephyrus on 2008-12-25 15:04:56 as ** along with 10 people and 2 groups JustinCrocker bpcusack bertrandservin cisevol operon emptyhb shoshin djkt gdb caseybrown R.E.A.D cis-regulatory-evolution
  • Y eat?
    Nutrition, Vol. 24, No. 9. (September 2008), pp. 869-877.
    by M Chee, W Colmers
    posted to regulation read obesity nutrition evolution energy development balance by Zephyrus on 2008-11-13 22:09:03 as ** along with 1 group R.E.A.D
  • IL-1beta-Mediated Proinflammatory Responses Are Inhibited by Estradiol via Down-Regulation of IL-1 Receptor Type I in Uterine Epithelial Cells
    J Immunol, Vol. 175, No. 10. (15 November 2005), pp. 6509-6516.
    by Todd M Schaefer, Jacqueline A Wright, Patricia A Pioli, Charles R Wira
    posted to immunomodulation il1b wira uterine thesis reproduction regulation receptor inflammation hormone estrogen epithelium by Zephyrus on 2008-10-27 07:02:43 as **
  • The Role of Estrogen Receptors and Androgen Receptors in Sex Steroid Regulation of B Lymphopoiesis
    J Immunol, Vol. 161, No. 1. (1 July 1998), pp. 27-34.
    by Glennda Smithson, John F Couse, Dennis B Lubahn, Kenneth S Korach, Paul W Kincade
    posted to thesis steroid regulation receptor estrogen b-cells by Zephyrus on 2008-10-17 03:21:15 as **
  • CD47 expression on T cell is a self-control negative regulator of type 1 immune response.
    Journal of immunology (Baltimore, Md. : 1950), Vol. 180, No. 12. (15 June 2008), pp. 8073-8082.
    by S Bouguermouh, VQ Van, J Martel, P Gautier, M Rubio, M Sarfati
    posted to thesis th2 th1 regulation polarization negative confounder cd47 by Zephyrus on 2008-10-21 04:13:55 as **
  • Adipose tissue hormones and the regulation of food intake.
    Journal of neuroendocrinology, Vol. 20, No. 6. (June 2008), pp. 842-849.
    by BA Henry, IJ Clarke
    posted to thesis regulation immunomodulation estrogen background adipose by Zephyrus on 2008-11-30 22:23:12 as ** along with 1 person FW_Gibb
  • Orchestrating the orchestrators: chemokines in control of T cell traffic
    Nat Immunol, Vol. 9, No. 9. (2008), pp. 970-980.
    by Shannon K Bromley, Thorsten R Mempel, Andrew D Luster
    posted to traffic t-cells regulation immunology chemokines by Zephyrus on 2008-09-12 04:46:27 as ** along with 1 person shimi002
  • IL-6 as a Regulatory Factor of the Humoral Response During Pregnancy
    American Journal of Reproductive Immunology, Vol. 60, No. 3. (September 2008), pp. 197-203.
    by Dubinsky, Valeria, Junovich, Gisela, Gentile, Teresa, Gutierrez, Gabriela
    posted to thesis regulation pregnancy il6 humoral by Zephyrus on 2008-10-21 04:18:36 as **
  • Regulation of Mitochondrial Antiviral Signaling Pathways
    Immunity, Vol. 28, No. 6. (13 June 2008), pp. 735-739.
    by C Moore, J Ting
    posted to evolepi toll-like-receptor regulation pattern-recognition-receptors mitochondria endemic antiviral by Zephyrus on 2008-11-03 22:28:03 as **
  • Hormonal regulation of the humoral innate immune response in Drosophila melanogaster
    J Exp Biol, Vol. 211, No. 16. (15 August 2008), pp. 2712-2724.
    by Thomas Flatt, Andreas Heyland, Florentina Rus, Ermelinda Porpiglia, Chris Sherlock, Rochele Yamamoto, Alina Garbuzov, Subba R Palli, Marc Tatar, Neal Silverman
    posted to thesis response regulation read innate immune hormone by Zephyrus on 2008-11-12 00:38:25 as ** along with 1 group R.E.A.D
  • Assaying the regulatory potential of mammalian conserved non-coding sequences in human cells
    Genome Biology, Vol. 9 (02 December 2008), R168.
    by Catia, John A Stamatoyannopoulos
    posted to review regulation non-coding genetics cancer-crosstalk by Zephyrus on 2008-12-30 20:03:41 as ** along with 6 people and 3 groups djkt oelemento xianjun samgj maximilianh cisevol Roswell Cancer Crosstalk JacksonLab BergmanLab
  • notes An End to Endless Forms: Epistasis, Phenotype Distribution Bias, and Nonuniform Evolution
    PLoS Comput Biol, Vol. 4, No. 10. (24 October 2008), e1000202.
    by Elhanan Borenstein, David C Krakauer
    posted to phenotype silent regulation non-uniform non-coding genetics evolution by Zephyrus on 2008-10-31 06:44:50 as ** along with 12 people and 2 groups qwermish bpcusack joseph_x_zhou bayesian biomcgary davfre jago mjoach grahamc alhufton dlobo djkt R.E.A.D GEB
  • CpG Methylation of the IFNG Gene as a Mechanism to Induce Immunosupression in Tumor-Infiltrating Lymphocytes
    J Immunol, Vol. 181, No. 4. (15 August 2008), pp. 2878-2886.
    by Peter C Janson, Per Marits, Magnus Thorn, Rolf Ohlsson, Ola Winqvist
    posted to tils regulation read methylation immunosuppression immunology epigenetics by Zephyrus on 2008-11-07 09:55:10 as ** along with 1 group R.E.A.D
  • Estrogen Regulates CCR Gene Expression and Function in T Lymphocytes
    J Immunol, Vol. 174, No. 10. (15 May 2005), pp. 6023-6029.
    by Ruran Mo, Jun Chen, Annabelle Grolleau-Julius, Hedwig S Murphy, Bruce C Richardson, Raymond L Yung
    posted to thesis t-cells regulation gene estrogen autoimmune by Zephyrus on 2008-10-17 02:24:57 as **
  • Genome-Wide Functional Synergy between Amplified and Mutated Genes in Human Breast Cancer
    Cancer Res, Vol. 68, No. 22. (15 November 2008), pp. 9532-9540.
    by Yuri Nikolsky, Evgeny Sviridov, Jun Yao, Damir Dosymbekov, Vadim Ustyansky, Valery Kaznacheev, Zoltan Dezso, Laura Mulvey, Laura E Macconaill, Wendy Winckler, Tatiana Serebryiskaya, Tatiana Nikolskaya, Kornelia Polyak
    posted to regulation mutation gwas genetics cancer breast amplification by Zephyrus on 2008-12-07 17:50:20 as ** along with 1 person and 1 group chrisamiller Breast Cancer Reading Club
  • Regulating a Monopolist with Unknown Costs
    Econometrica, Vol. 50, No. 4. (1982), pp. 911-930.
    by David P Baron, Roger B Myerson
    posted to policy regulation by YoshiY on 2008-07-02 14:15:18 as ***
  • The Politics of Government Decision-Making: A Theory of Regulatory Capture
    The Quarterly Journal of Economics, Vol. 106, No. 4. (1991), pp. 1089-1127.
    by Jean-Jacques Laffont, Jean Tirole
    posted to agency contract political_economy regulation by YoshiY on 2008-07-02 08:54:02 as **** along with 1 person ChristianRauh
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