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Tag thesisdlobo [48 articles]

Recent papers classified by the tag thesisdlobo.
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  • Massive Horizontal Gene Transfer in Bdelloid Rotifers
    Science, Vol. 320, No. 5880. (30 May 2008), pp. 1210-1213.
    by Eugene A Gladyshev, Matthew Meselson, Irina R Arkhipova
    posted to thesisdlobo genetics biology by dlobo to the group GEB on 2008-12-19 15:07:17 as ** along with 5 people ramanuja mjoach mblwhoi biomcgary bpcusack
  • Handbook of Graph Grammars and Computing by Graph Transformations: Concurrency, Parallelism, and Distribution
    (31 July 1999)
    by Kreowski
    posted to graph thesisdlobo by dlobo to the group GEB on 2008-09-29 16:37:03 as ** along with 2 people and 1 group RWeiss AbnerCYH CSBBGraphTheory
  • METAMorph: Experimenting with Genetic Regulatory Networks for Artificial Development
    by Finlay Stewart, Tim Taylor, George Konidaris
    posted to thesisdlobo grn by dlobo to the group GEB on 2008-09-04 17:34:09 as **
  • The Mathematical Theory of L Systems (Pure and applied mathematics, a series of monographs and textbooks)
    by Grzegorz Rozenberg
    posted to thesisdlobo l-systems by dlobo to the group GEB on 2008-10-02 14:47:40 as **
  • Artificial symbiogenesis.
    Artificial life, Vol. 2, No. 3. (1995), pp. 269-292.
    by L Bull, TC Fogarty
    posted to thesisdlobo by dlobo to the group GEB on 2008-09-02 10:28:46 as **
  • Node replacement graph grammars
    (1997), pp. 1-94.
    by J Engelfriet, G Rozenberg
    posted to thesisdlobo graph by dlobo to the group GEB on 2008-10-06 15:53:15 as **
  • Hyperedge replacement graph grammars
    (1997), pp. 95-162.
    by F Drewes, HJ Kreowski, A Habel
    posted to thesisdlobo graph by dlobo to the group GEB on 2008-09-30 14:34:32 as **
  • Evo–devo: extending the evolutionary synthesis
    Nature Reviews Genetics, Vol. 8, No. 12., pp. 943-949.
    by Gerd B Müller
    posted to thesisdlobo evo-devo biology by dlobo to the group GEB on 2008-11-24 09:18:53 as ** along with 1 person dchughes
  • Innovation and robustness in complex regulatory gene networks.
    Proc Natl Acad Sci U S A (9 August 2007)
    by S Ciliberti, O C C Martin, A Wagner
    posted to thesisdlobo regulation grn by dlobo to the group GEB on 2008-11-21 10:16:35 as ** along with 8 people and 2 groups balicea dakelley cmzmasek jmenche dpollard sebastien_vigneau zwang cisevol EisenLab cis-regulatory-evolution
  • An End to Endless Forms: Epistasis, Phenotype Distribution Bias, and Nonuniform Evolution
    PLoS Comput Biol, Vol. 4, No. 10. (24 October 2008), e1000202.
    by Elhanan Borenstein, David C Krakauer
    posted to thesisdlobo grn complexity by dlobo to the group GEB on 2008-10-27 12:12:59 as ** along with 12 people and 1 group qwermish bpcusack joseph_x_zhou bayesian biomcgary davfre jago Zephyrus mjoach grahamc alhufton djkt R.E.A.D
  • Evolutionary Robustness of Differentiation in Genetic Regulatory Networks
    by Johannes F Knabe, Chrystopher L Nehaniv, Maria J Schilstra
    posted to thesisdlobo grn differentiation by dlobo to the group GEB on 2008-09-15 11:24:48 as **
  • The evolution of self-replicating computer organisms
    Physica D (November 1996), pp. 111-127.
    by AN Pargellis
    posted to thesisdlobo indirect by dlobo to the group GEB on 2008-07-28 17:17:59 as **
  • Structural variation in the human genome
    Nature Reviews Genetics, Vol. 7, No. 2., pp. 85-97.
    by Lars Feuk, Andrew R Carson, Stephen W Scherer
    posted to thesisdlobo genetics evolution biology by dlobo to the group GEB on 2008-11-06 17:02:59 as ** along with 17 people and 10 groups Zephyrus jandot cgreal balajis bala balicea dchughes tabu darcyduke adepace AaronDarling rdiaz massivemayhem cat_worth jmrivort ccr Lip CGREL structural_bioinformatics Bioinformatics EisenLab SFX-Verde-team-MITLibraries G4ID G-quadruplex Supramolecular DictyosteliumGroup Genetics-of-Gambling
  • Handbook of Graph Grammars and Computing by Graph Transformation: Applications, Languages and Tools
    by H Ehrig, G Engels, HJ Kreowski
    posted to graph thesisdlobo by dlobo to the group GEB on 2008-09-29 16:36:44 as ** along with 3 people and 1 group RWeiss wnpx AbnerCYH CSBBGraphTheory
  • Evolving Embodied Genetic Regulatory Network-Driven Control Systems
    Advances in Artificial Life (2003), pp. 266-277.
    by Tom Quick, Chrystopher L Nehaniv, Kerstin Dautenhahn, Graham Roberts
    posted to thesisdlobo indirect grn by dlobo to the group GEB on 2008-09-15 17:01:10 as **
  • Shadow Enhancers as a Source of Evolutionary Novelty
    Science, Vol. 321, No. 5894. (5 September 2008), 1314.
    by Joung-Woo Hong, David A Hendrix, Michael S Levine
    posted to thesisdlobo genetics biology by dlobo to the group GEB on 2008-09-29 08:49:07 as ** along with 14 people and 1 group jfr rouault emptyhb sebastien_vigneau Stew bpcusack Ema carlfulp Zephyrus djkt natstreet isimpson maximilianh caseybrown Roswell Cancer Crosstalk
  • Programmed Graph Replacement Systems
    Vol. 1 (1997), pp. 479-546.
    by Andy Schurr
    posted to thesisdlobo graph by dlobo to the group GEB on 2008-09-30 14:31:07 as **
  • Fundamentals of Algebraic Graph Transformation (Monographs in Theoretical Computer Science. An EATCS Series)
    (14 March 2006)
    by H Ehrig, K Ehrig, U Prange, G Taentzer
    posted to thesisdlobo graph by dlobo to the group GEB on 2008-10-08 09:59:24 as ** along with 2 people leonardo AbnerCYH
  • Network motifs: theory and experimental approaches
    Nature Reviews Genetics, Vol. 8, No. 6., pp. 450-461.
    by Uri Alon
    posted to thesisdlobo regulation grn by dlobo to the group GEB on 2008-09-22 08:55:32 as ** along with 22 people and 3 groups renatomilani heliopais snow_dragon druvus pengchy cswinburne kentz icases aalibes cmmorel jtaylor dbikard margaritis shigepong zwang grinfish Pascalichouchou xingxu karfunkel vietanh0 haarcuba Borelli TNT Centre de Recherches Interdisciplinaires SynBioSys
  • Handbook of Grammars and Computing by Graph Transformation
    (15 January 1997)
    by Grzegorz Rozenberg
    posted to graph thesisdlobo by dlobo to the group GEB on 2008-09-29 16:31:06 as ** along with 6 people and 3 groups RWeiss ansobol wnpx AbnerCYH smazanek luiinge GraphTheory modeling CSBBGraphTheory
  • The digital code of DNA
    Nature, Vol. 421, No. 6921. (23 January 2003), pp. 444-448.
    by Leroy Hood, David Galas
    posted to thesisdlobo genetics by dlobo to the group GEB on 2008-09-04 17:15:00 as **
  • The transition from differential equations to Boolean networks: A case study in simplifying a regulatory network model
    Journal of Theoretical Biology, Vol. 255, No. 3. (07 December 2008), pp. 269-277.
    by M Davidich, S Bornholdt
    posted to thesisdlobo regulation grn by dlobo to the group GEB on 2008-11-14 16:46:06 as **
  • Neutrality and Robustness in Evo-Devo: Emergence of Lateral Inhibition
    PLoS Comput Biol, Vol. 4, No. 11. (21 November 2008), e1000226.
    by Andreea Munteanu, Ricard V Solé
    posted to thesisdlobo grn evolution evo-devo by dlobo to the group GEB on 2008-11-24 09:30:06 as ** along with 3 people and 2 groups joseph_x_zhou bayesian bpcusack Evolutionary Dynamics Math Bio bioNetwork_sysBio
  • Transcriptional Autoregulatory Loops Are Highly Conserved in Vertebrate Evolution
    PLoS ONE, Vol. 3, No. 9. (2008), e3210.
    by Szymon M Kiełbasa, Martin Vingron
    posted to thesisdlobo regulation grn evolution by dlobo to the group GEB on 2008-09-22 08:53:34 as **
  • Towards more relevant evolutionary models: Integrating an artificial genome with a developmental phenotype
    (2003), pp. 288-298.
    by James Watson, Janet Wiles, Jim Hanan
    posted to thesisdlobo by dlobo to the group GEB on 2008-09-04 16:53:38 as **
  • Evolving Dynamics in an Artificial Regulatory Network Model
    (2004), pp. 571-580.
    by Dwight P Kuo, André Leier, Wolfgang Banzhaf
    posted to thesisdlobo grn by dlobo to the group GEB on 2008-09-04 16:58:29 as **
  • GENETICS: It's the Sequence, Stupid!
    Science, Vol. 322, No. 5900. (17 October 2008), pp. 380-381.
    by Hilary A Coller, Leonid Kruglyak
    posted to thesisdlobo regulation genetics biology by dlobo to the group GEB on 2008-10-21 09:09:36 as ** along with 9 people and 3 groups GustavoLacerda Zephyrus cisevol isimpson bpcusack reyez djkt ptrobajo marck Roswell Cancer Crosstalk cis-regulatory-evolution BergmanLab
  • Mathematical modelling in the post-genome era: understanding genome expression and regulation—a system theoretic approach
    Biosystems, Vol. 65, No. 1. (February 2002), pp. 1-18.
    by O Wolkenhauer
    posted to thesisdlobo modeling grn by dlobo to the group GEB on 2008-10-29 17:36:52 as **
  • Gene Expression Programming: a New Adaptive Algorithm for Solving Problems
    ArXiv Computer Science e-prints (February 2001)
    by C Ferreira
    posted to thesisdlobo indirect by dlobo to the group GEB on 2008-12-03 14:19:16 as **
  • Do motifs reflect evolved function?—No convergent evolution of genetic regulatory network subgraph topologies☆
    Biosystems (20 June 2008)
    by J Knabe, C Nehaniv, M Schilstra
    posted to thesisdlobo grn evolution by dlobo to the group GEB on 2008-11-03 15:50:46 as ** along with 1 person jknabe
  • Effects of Spatial Growth on Gene Expression Dynamics and on Regulatory Network Reconstruction
    by Jan T Kim
    posted to thesisdlobo grn by dlobo to the group GEB on 2008-09-04 17:19:10 as **
  • Regulatory Genes Control a Key Morphological and Ecological Trait Transferred Between Species
    Science, Vol. 322, No. 5904. (14 November 2008), pp. 1116-1119.
    by Minsung Kim, Min-Long Cui, Pilar Cubas, Amanda Gillies, Karen Lee, Mark A Chapman, Richard J Abbott, Enrico Coen
    posted to thesisdlobo evolution biology by dlobo to the group GEB on 2008-11-14 11:42:04 as **
  • Algebraic approaches to graph transformation. Part II: single pushout approach and comparison with double pushout approach
    (1997), pp. 247-312.
    by H Ehrig, R Heckel, M Korff, M Löwe, L Ribeiro, A Wagner, A Corradini
    posted to thesisdlobo graph by dlobo to the group GEB on 2008-10-07 10:43:11 as **
  • Natural Selection Fails to Optimize Mutation Rates for Long-Term Adaptation on Rugged Fitness Landscapes
    PLoS Comput Biol, Vol. 4, No. 9. (2008), e1000187.
    by Jeff Clune, Dusan Misevic, Charles Ofria, Richard E Lenski, Santiago F Elena, Rafael Sanjuán
    posted to thesisdlobo evolution alife by dlobo to the group GEB on 2008-09-29 15:08:36 as ** along with 1 person rebeccamancy
  • Extremal Problems for Geometric Hypergraphs
    (1996), pp. 105-114.
    by Tamal K Dey, János Pach
    posted to thesisdlobo graph by dlobo to the group GEB on 2008-10-01 15:55:21 as **
  • On Learning Gene Regulatory Networks Under the Boolean Network Model
    Machine Learning, Vol. 52, No. 1. (1 July 2003), pp. 147-167.
    by Harri Lähdesmäki, Ilya Shmulevich, Olli Yli-Harja
    posted to thesisdlobo modeling grn by dlobo to the group GEB on 2008-11-11 17:19:02 as **
  • Biologically Inspired Evolutionary Development
    Evolvable Systems: From Biology to Hardware (2003), pp. 99-106.
    by Sanjeev Kumar, Peter J Bentley
    posted to thesisdlobo indirect grn differentiation development by dlobo to the group GEB on 2008-09-15 17:20:16 as **
  • Species-Specific Transcription in Mice Carrying Human Chromosome 21
    Science (11 September 2008), 1160930.
    by Michael D Wilson, Nuno L Barbosa-Morais, Dominic Schmidt, Caitlin M Conboy, Lesley Vanes, Victor L Tybulewicz, Elizabeth M Fisher, Simon Tavare, Duncan T Odom
    posted to thesisdlobo regulation genetics biology by dlobo to the group GEB on 2008-10-21 09:00:00 as ** along with 17 people and 1 group jbhiatt GustavoLacerda ptrobajo ivanek kaarsinogen jmjimenez jessopher isimpson djkt strands caseybrown erel10 Zephyrus sebastien_vigneau Stew bpcusack emptyhb Roswell Cancer Crosstalk
  • Evolving genetic regulatory networks using an artificial genome
    Vol. 29 (2004), pp. 291-296.
    by Jennifer Hallinan, Janet Wiles
    posted to thesisdlobo grn by dlobo to the group GEB on 2008-09-04 16:54:37 as **
  • Robustness, evolvability, and neutrality.
    FEBS Lett, Vol. 579, No. 8. (21 March 2005), pp. 1772-1778.
    by A Wagner
    posted to thesisdlobo evolution by dlobo to the group GEB on 2008-11-27 17:29:37 as *** along with 2 people and 1 group stevanspringer timflutre FAB-lab
  • Structure and dynamics of a gene network model incorporating small rnas
    (2003), pp. 199-206.
    by Nicholas Geard
    posted to thesisdlobo grn by dlobo to the group GEB on 2008-09-04 16:39:50 as ** along with 1 person tomhebbron
  • Geometric Graphs and Arrangements: Some Chapters from Combinatorial Geometry
    by Stefan Felsner
    posted to graph thesisdlobo by dlobo to the group GEB on 2008-09-29 09:27:44 as **
  • Modeling the fitness of plant morphologies across three levels of complexity
    Biosystems, Vol. 94, No. 1-2. (October 2008), pp. 182-190.
    by J Watson, J Hanan, J Wiles
    posted to thesisdlobo indirect grn development by dlobo to the group GEB on 2008-10-20 17:09:50 as **
  • Algebraic approaches to graph transformation part I: Basic concepts and double pushout approach
    Vol. 97, No. 1. (1997), pp. 163-245.
    by M Loewe, A Corradini, A Corradini, U Montanari, U Montanari, F Rossi, F Rossi, H Ehrig, H Ehrig, R Heckel, R Heckel, Owe
    posted to thesisdlobo graph by dlobo to the group GEB on 2008-10-01 11:04:10 as **
  • A genetic regulatory network-inspired real-time controller for a group of underwater robots
    (2004), pp. 403-412.
    by Tim Taylor
    posted to thesisdlobo grn by dlobo to the group GEB on 2008-09-04 16:55:37 as **
  • Facilitated Variation: How Evolution Learns from Past Environments To Generalize to New Environments
    PLoS Comput Biol, Vol. 4, No. 11. (7 November 2008), e1000206.
    by Merav Parter, Nadav Kashtan, Uri Alon
    posted to thesisdlobo evolution by dlobo to the group GEB on 2008-11-10 08:48:40 as ** along with 6 people djkt balicea shoshin rebeccamancy cabbagesofdoom kentsis
  • Lindenmayer Systems: Impacts on Theoretical Computer Science, Computer Graphics, and Developmental Biology
    (20 August 1992)
    posted to thesisdlobo l-systems by dlobo to the group GEB on 2008-10-02 14:46:04 as **
  • A Graph Grammar Approach to Artificial Life
    Artificial Life, Vol. 10, No. 4., 413.
    by Ole Kniemeyer, Gerhard H Buck-Sorlin, Winfried Kurth
    posted to thesisdlobo indirect development alife by dlobo to the group GEB on 2008-12-02 13:23:09 as **
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