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Tag transcription-regulation [16 articles]

Recent papers classified by the tag transcription-regulation.
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  • Shadow Enhancers as a Source of Evolutionary Novelty
    Science, Vol. 321, No. 5894. (5 September 2008), 1314.
    by Joung-Woo Hong, David A Hendrix, Michael S Levine
  • DNA binding sites: representation and discovery.
    Bioinformatics, Vol. 16, No. 1. (January 2000), pp. 16-23.
    by GD Stormo
  • CisModule: de novo discovery of cis-regulatory modules by hierarchical mixture modeling.
    Proc Natl Acad Sci U S A, Vol. 101, No. 33. (17 August 2004), pp. 12114-12119.
    by Q Zhou, WH Wong
  • Computational identification of transcriptional regulatory elements in DNA sequence
    Nucl. Acids Res., Vol. 34, No. 12. (19 July 2006), pp. 3585-3598.
    by Debraj Guhathakurta
  • Computation-based discovery of related transcriptional regulatory modules and motifs using an experimentally validated combinatorial model.
    Genome Res, Vol. 12, No. 7. (July 2002), pp. 1019-1028.
    by MS Halfon, Y Grad, GM Church, AM Michelson
  • Predicting expression patterns from regulatory sequence in Drosophila segmentation
    Nature (02 January 2008)
    by Eran Segal, Tali Raveh-Sadka, Mark Schroeder, Ulrich Unnerstall, Ulrike Gaul
  • GENETICS: It's the Sequence, Stupid!
    Science, Vol. 322, No. 5900. (17 October 2008), pp. 380-381.
    by Hilary A Coller, Leonid Kruglyak
  • GENETICS: Enhancing Gene Regulation
    Science, Vol. 321, No. 5894. (5 September 2008), pp. 1300-1301.
    by Gregory A Wray, Courtney C Babbitt
  • Target Explorer: An automated tool for the identification of new target genes for a specified set of transcription factors.
    Nucleic acids research, Vol. 31, No. 13. (1 July 2003), pp. 3589-3592.
    by A Sosinsky, CP Bonin, RS Mann, B Honig
  • Homotypic regulatory clusters in Drosophila.
    Genome Res, Vol. 13, No. 4. (April 2003), pp. 579-588.
    by AP Lifanov, VJ Makeev, AG Nazina, DA Papatsenko
  • An ORFeome-based analysis of human transcription factor genes and the construction of a microarray to interrogate their expression.
    Genome Res, Vol. 14, No. 10B. (October 2004), pp. 2041-2047.
    by DN Messina, J Glasscock, W Gish, M Lovett
  • Modelling non-stationary gene regulatory processes with a non-homogeneous Bayesian network and the allocation sampler
    Bioinformatics, Vol. 24, No. 18. (15 September 2008), pp. 2071-2078.
    by Marco Grzegorczyk, Dirk Husmeier, Kieron D Edwards, Peter Ghazal, Andrew J Millar
  • Species-Specific Transcription in Mice Carrying Human Chromosome 21
    Science (11 September 2008), 1160930.
    by Michael D Wilson, Nuno L Barbosa-Morais, Dominic Schmidt, Caitlin M Conboy, Lesley Vanes, Victor L Tybulewicz, Elizabeth M Fisher, Simon Tavare, Duncan T Odom
  • Deciphering principles of transcription regulation in eukaryotic genomes
    Mol Syst Biol, Vol. 2, No. 1. (11 April 2006), pp. msb4100054-E1-msb4100054-E10.
    by Dat H Nguyen, Patrik D'Haeseleer
  • Computational detection of genomic cis-regulatory modules applied to body patterning in the early Drosophila embryo.
    BMC Bioinformatics, Vol. 3 (24 October 2002)
  • Human-Specific Gain of Function in a Developmental Enhancer
    Science, Vol. 321, No. 5894. (5 September 2008), pp. 1346-1350.
    by Shyam Prabhakar, Axel Visel, Jennifer A Akiyama, Malak Shoukry, Keith D Lewis, Amy Holt, Ingrid Plajzer-Frick, Harris Morrison, David R Fitzpatrick, Veena Afzal, Len A Pennacchio, Edward M Rubin, James P Noonan
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