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balicea's library [2269 articles]

Recent papers added to balicea's library.
  • Calorie restriction in biosphere 2: alterations in physiologic, hematologic, hormonal, and biochemical parameters in humans restricted for a 2-year period.
    J Gerontol A Biol Sci Med Sci, Vol. 57, No. 6. (June 2002)
    by RL Walford, D Mock, R Verdery, T MacCallum
    posted to musculoskeletal_systems general-physiology ecophysiology bio-astro adaptive-systems by balicea on 2008-08-16 05:29:20 as ** along with 1 person klouie
  • Current perspectives in zebrafish reverse genetics: moving forward.
    Developmental dynamics : an official publication of the American Association of Anatomists, Vol. 237, No. 4. (April 2008), pp. 861-882.
    by I Skromne, VE Prince
    posted to phenotype-to-genotype methods genotype-to-phenotype genome-association gene-expression functional-genome animal-model by balicea on 2008-08-09 05:57:22 as ** along with 1 person jyuh
  • Targeted gene inactivation in zebrafish using engineered zinc-finger nucleases
    Nature Biotechnology, Vol. 26, No. 6. (25 May 2008), pp. 695-701.
    by Xiangdong Meng, Marcus B Noyes, Lihua J Zhu, Nathan D Lawson, Scot A Wolfe
    posted to systems-biology methods genome-transcriptome general-physiology gene-expression functional-genome by balicea on 2008-08-09 05:55:16 as ** along with 2 people jyuh austin
  • Metabolic changes in schizophrenia and human brain evolution
    Genome Biology, Vol. 9 (05 August 2008), R124.
    by Philipp Khaitovich, Helen E Lockstone, Matthew T Wayland, Tsz M Tsang, Samantha D Jayatilaka, Arfu J Guo, Jie Zhou, Mehmet Somel, Laura W Harris, Elaine Holmes, Svante Paabo, Sabine Bahn
    posted to regulatory-cascades neuro-chem general-physiology evolution by balicea on 2008-08-09 05:51:43 as ** along with 1 person djkt
  • Population genetic and phylogenetic evidence for positive selection on regulatory mutations at the factor VII locus in humans.
    Genetics, Vol. 167, No. 2. (June 2004), pp. 867-877.
    by MW Hahn, MV Rockman, N Soranzo, DB Goldstein, GA Wray
    posted to regulatory-cascades pop-gen phylogeny phylogenetics nat-selection-tests genotype-to-phenotype genome-variation by balicea on 2008-08-07 16:47:05 as ** along with 2 people and 1 group pradiptaray cisevol cis-regulatory-evolution
  • Gene Regulation: Boundaries within Limits
    Current Biology, Vol. 18, No. 15. (5 August 2008), pp. R653-R655.
    by Sandhya Payankaulam, David n Arnosti
    posted to reviews regulatory-cascades phenotype-to-genotype genotype-to-phenotype gene-expression animal-model by balicea on 2008-08-07 16:44:05 as ** along with 2 people ackman inesdesantiago
  • Transcriptional Control in the Segmentation Gene Network of Drosophila
    PLoS Biology, Vol. 2, No. 9. (1 September 2004), e271.
    by Mark D Schroeder, Michael Pearce, John Fak, Hongqing Fan, Ulrich Unnerstall, Eldon Emberly, Nikolaus Rajewsky, Eric D Siggia, Ulrike Gaul
    posted to systems-biology regulatory-cascades networks genome-transcriptome gene-expression animal-model by balicea on 2008-08-07 16:36:17 as ** along with 7 people and 3 groups pradiptaray indigoviolet dpollard adepace wrowell emptyhb dlmace EisenLab Cline_lab UH - Computational Biology
  • Networks, Dynamics, and the Small-World Phenomenon
    The American Journal of Sociology, Vol. 105, No. 2. (1999), pp. 493-527.
    by Duncan J Watts
    posted to systems-biology reviews networks cultural-evolution complexity bio-stat applied-math adaptive-systems by balicea on 2008-08-07 04:16:28 as ** along with 10 people and 4 groups ganden chibatching shelearns craigwilson06 dperkel mbliemel lyongu irinas voiklis ransombriggs Papershare sims_phd_cohort_2005 digital_youth ColDyn
  • Correction of muscle artefacts in the EEG power spectrum.
    Clinical Neurophysiology, Vol. 116 (2005), pp. 2044-2050.
    by T Gasser, JC Schuller, US Gasser
    posted to neuro-tech neuro-spike methods cog-neuro by balicea on 2008-08-05 19:00:09 as **
  • Discerning static and causal interactions in genome-wide reverse engineering problems.
    Bioinformatics (Oxford, England) (8 May 2008)
    by M Zampieri, N Soranzo, C Altafini
    posted to phenotype-to-genotype modeling-and-simulation genotype-to-phenotype genome-interactome evolutionary-genomics bio-stat applied-math by balicea on 2008-08-04 22:23:43 as ** along with 4 people jyuh tmmurali verdicchio roys
  • Alternative splicing and protein structure evolution.
    Nucleic Acids Res, Vol. 36, No. 2. (February 2008), pp. 550-558.
    by F Birzele, G Csaba, R Zimmer
    posted to reviews genome-splicings evolutionary-proteomics evolution by balicea on 2008-08-04 22:21:41 as ** along with 3 people msierk chad_davis bootsy
  • AMPK and PPARδ Agonists Are Exercise Mimetics.
    Cell (2008)
    by Vihang
    posted to regulatory-cascades physiological-remodeling performance-augmentation musculoskeletal_systems molecular-signaling molecular-general gene-expression by balicea on 2008-08-02 06:24:09 as **
  • AMP-activated protein kinase (AMPK) action in skeletal muscle via direct phosphorylation of PGC-1alpha.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 29. (17 July 2007), pp. 12017-12022.
    by S Jäger, C Handschin, J St-Pierre, BM Spiegelman
    posted to regulatory-cascades musculoskeletal_systems molecular-signaling gene-expression functional-genome by balicea on 2008-08-02 06:21:10 as ** along with 1 person jyuh
  • AMPK and transcriptional regulation.
    Front Biosci, Vol. 13 (2008), pp. 3022-3033.
    by SL McGee, M Hargreaves
    posted to regulatory-cascades musculoskeletal_systems molecular-signaling growth-regulation gene-expression functional-genome by balicea on 2008-08-02 06:20:02 as ** along with 2 people maimoni arne
  • Computational methods for transcriptional regulation.
    Curr Opin Genet Dev, Vol. 15, No. 2. (April 2005), pp. 214-221.
    by ED Siggia
    posted to regulatory-cascades physiological-remodeling molecular-signaling modeling-and-simulation genome-transcriptome gene-expression cell-models by balicea on 2008-07-29 20:00:41 as ** along with 7 people and 2 groups jjray nklee Borelli bertelsen barry dpollard koller Bioinformatics EisenLab
  • Do viruses form lineages across different domains of life?
    Research in microbiology, Vol. 154, No. 4. (May 2003), pp. 231-236.
    by DH Bamford
    posted to phylogeny evolution bio-astro by balicea on 2008-07-29 18:07:01 as ** along with 1 person jwm
  • Comparative genomics: Difference of expression
    Nature, Vol. 440, No. 7081. (March 2006), pp. 161-161.
    by Rasmus Nielsen
    posted to speciation regulatory-cascades gene-expression functional-genome evolvability evolution comparative-neuro by balicea on 2008-07-29 05:12:12 as ** along with 4 people and 3 groups stevanspringer xwbcn dchughes echinotrix FAB-lab G4ID Genetics-of-Gambling
  • Spectral biclustering of microarray data: coclustering genes and conditions.
    Genome Res, Vol. 13, No. 4. (April 2003), pp. 703-716.
    by Y Kluger, R Basri, JT Chang, M Gerstein
    posted to systems-biology microarray genome-prediction gene-expression bio-stat by balicea on 2008-07-29 05:08:19 as ** along with 7 people tvdbulck rmj001 tuck yuval filippone shigepong dps
  • The use and analysis of microarray data.
    Nat Rev Drug Discov, Vol. 1, No. 12. (December 2002), pp. 951-960.
    by A Butte
    posted to reviews microarray gene-expression by balicea on 2008-07-29 05:06:11 as ** along with 3 people and 1 group irenas ziquje numata dbk-lab
  • Tissue-driven hypothesis of genomic evolution and sequence-expression correlations.
    Proc Natl Acad Sci U S A (14 February 2007)
    by Xun Gu, Zhixi Su
    posted to systems-biology genome-sequencing genome-association gene-expression functional-genome evolutionary-genomics cell-models by balicea on 2008-07-29 05:04:46 as ** along with 5 people xwbcn gpalidwor shigepong cjeans ghattem
  • Evolution of genes and genomes on the Drosophila phylogeny
    Nature, Vol. 450, No. 7167. (November 2007), pp. 203-218.
    posted to reviews phylogeny phylogenetics genome-structure evolvability evolutionary-genomics animal-model by balicea on 2008-07-29 05:00:44 as ** along with 19 people and 6 groups hdopazo cisevol isimpson CharlesM PetrovLab operon tmmurali indigoviolet djkt timflutre stajich zwang Garamonfok lp2 hpaces caseybrown emptyhb urgi noor Drosophila-Genetics-Genomics-2008 BergmanLab Bioinformatics EisenLab csb_journal_club_public Berkeley Mycology
  • Living with death: the evolution of the mitochondrial pathway of apoptosis in animals
    Cell Death and Differentiation, Vol. aop, No. current.
    by A Oberst, C Bender, DR Green
    posted to regulatory-cascades molecular-signaling evolution development apoptosis animal-model aging by balicea on 2008-07-28 02:44:55 as ** along with 2 people cmzmasek paulschlesinger
  • Exercise and gene expression: physiological regulation of the human genome through physical activity
    J Physiol, Vol. 543, No. 2. (1 September 2002), pp. 399-411.
    by Frank W Booth, Manu V Chakravarthy, Espen E Spangenburg
    posted to reviews regulatory-cascades physiological-remodeling musculoskeletal_systems growth-regulation gene-expression functional-genome exercise by balicea on 2008-07-28 02:18:15 as **
  • Aged human muscle demonstrates an altered gene expression profile consistent with an impaired response to exercise.
    Mech Ageing Dev, Vol. 120, No. 1-3. (1 December 2000), pp. 45-56.
    by AC Jozsi, EE Dupont-Versteegden, JM Taylor-Jones, WJ Evans, TA Trappe, WW Campbell, CA Peterson
    posted to musculoskeletal_systems growth-regulation general-physiology gene-expression exercise aging by balicea on 2008-07-28 02:07:24 as ** along with 1 person ajw
  • Apoptosis and exercise.
    Medicine and science in sports and exercise, Vol. 33, No. 3. (March 2001), pp. 393-396.
    by S Phaneuf, C Leeuwenburgh
    posted to reviews physiological-remodeling exercise development aging by balicea on 2008-07-28 02:04:49 as ** along with 1 person faytn
  • Reversing age-associated immunosenescence via exercise.
    Exercise immunology review, Vol. 10 (2004), pp. 6-41.
    by ML Kohut, DS Senchina
    posted to regulatory-cascades genome-senescence functional-genome exercise aging by balicea on 2008-07-28 02:02:44 as ** along with 1 person faytn
  • Stage-specific expression of alpha1,2-fucosyltransferase and alpha1, 3-fucosyltransferase (FT) during mouse embryogenesis.
    European journal of biochemistry / FEBS, Vol. 265, No. 1. (1 October 1999), pp. 258-263.
    by N Liu, C Jin, ZM Zhu, J Zhang, H Tao, C Ge, S Yang, S Zhang
    posted to molecular-signaling genome-transcriptome general-physiology gene-expression development animal-model by balicea on 2008-07-28 02:00:24 as ** along with 1 person MllePapillon
  • Colonization of Venus
    SPACE TECHNOLOGY AND APPLICATIONS INT.FORUM-STAIF 2003: Conf.on Thermophysics in Microgravity; Commercial/Civil Next Generation Space Transportation; Human Space Exploration; Symps.on Space Nuclear Power and Propulsion (20th); Space Colonization (1st), Vol. 654, No. 1. (2003), pp. 1193-1198.
    by Geoffrey A Landis
    edited by Mohamed
    posted to planet-model ecophysiology earth-science bio-astro by balicea on 2008-07-28 01:48:12 as ** along with 1 person GeeSharpMinor
  • Establishment and stabilization of earthlike conditions on Venus
    Journal of the British Interplanetary Society, Vol. 44 (April 1991), pp. 151-156.
    by SL Gillett
    posted to planet-model ecophysiology earth-science bio-astro by balicea on 2008-07-28 01:47:36 as ** along with 1 person GeeSharpMinor
  • Terraforming Venus Quickly
    Journal of the British Interplanetary Society, Vol. 44 (1991), pp. 157-167.
    by P Birch
    posted to planet-model ecophysiology earth-science bio-astro by balicea on 2008-07-28 01:46:42 as ** along with 1 person GeeSharpMinor
  • Colonization of Venus
    Vol. 654 (January 2003), pp. 1193-1198.
    by GA Landis
    edited by MS El-Genk
    posted to planet-model ecophysiology earth-science bio-astro by balicea on 2008-07-28 01:45:16 as ** along with 1 person GeeSharpMinor
  • Cell and environment interactions in tumor microregions: the multicell spheroid model.
    Science (New York, N.Y.), Vol. 240, No. 4849. (8 April 1988), pp. 177-184.
    by RM Sutherland
    posted to systems-biology genotype-to-phenotype genome-interactome gene-gene ecophysiology cell-models by balicea on 2008-07-28 01:31:07 as ** along with 1 person bakakaj
  • Less is more, except when less is less: Studying joint effects.
    Genomics (18 July 2008)
    by C R R Weinberg
    posted to reviews gene-gene by balicea on 2008-07-25 16:29:22 as ** along with 1 person jyuh
  • Computing Knock-Out Strategies in Metabolic Networks
    Journal of Computational Biology, Vol. 15, No. 3. (2008), pp. 259-268.
    by Utz-Uwe Haus, Steffen Klamt, Tamon Stephen
    posted to reviews networks methods metabolomics by balicea on 2008-07-25 16:28:01 as ** along with 5 people and 1 group longoka Borelli jiny tmmurali ptrobajo Frontiers in Diabetes and Obesity
  • A gene network approach to modeling early neurogenesis in Drosophila.
    Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (1998), pp. 30-41.
    by G Marnellos, E Mjolsness
    posted to networks gene-expression development cell-models animal-model by balicea on 2008-07-25 16:27:10 as ** along with 1 person and 1 group dlobo GEB
  • Compositional Evolution: The Impact of Sex, Symbiosis, and Modularity on the Gradualist Framework of Evolution (Vienna Series in Theoretical Biology)
    (17 February 2006)
    by Richard A Watson
    posted to symbiosis sex-differentiation evolvability evolution complexity by balicea on 2008-07-25 16:23:11 as ** along with 1 person and 1 group dlobo GEB
  • A network-based method for target selection in metabolic networks
    Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. 1616-1622.
    by R Guimera, M Sales-Pardo, LAN Amaral
    posted to systems-biology networks metabolomics by balicea on 2008-07-25 16:21:28 as ** along with 2 people jiny AbnerCYH
  • Gene by environment interactions.
    Genetic epidemiology, Vol. 31 Suppl 1 (2007)
    by RC Culverhouse, BK Suarez, L Beckmann, P Chen, YS Chen, YF Chiu, J Chang-Claude, A Dempfle, R Hein, R Kazma, JJ Lebrec, S Lee, S Lim, BS Maher, T Park, H Perdry, KS Wang, PP Wolkow, W Xu
    posted to reviews genotype-to-phenotype genome-interactome gene-gene evolutionary-genomics epigenetics ecophysiology cross-talk bio-stat by balicea on 2008-07-22 04:04:38 as ** along with 1 person jyuh
  • Pyrosequencing sheds light on DNA sequencing.
    Genome Res, Vol. 11, No. 1. (January 2001), pp. 3-11.
    by M Ronaghi
    posted to methods genome-sequencing evo-tech by balicea on 2008-07-21 19:55:29 as ** along with 5 people and 1 group bozdagd darioacha kieran101 mariakmejia tpreeprem gatech-compgenomics
  • Glucocorticoids enhance taste aversion memory via actions in the insular cortex and basolateral amygdala
    Learn. Mem., Vol. 15, No. 7. (7 July 2008), pp. 468-476.
    by Maria I Miranda, Gina L Quirarte, Gabriela Rodriguez-Garcia, James L Mcgaugh, Benno Roozendaal
    posted to neuro-hormonal neuro-chem learning-and-memory by balicea on 2008-07-21 14:39:00 as **
  • Beyond transcription factors: The role of chromatin modifying enzymes in regulating transcription required for memory
    Learn. Mem., Vol. 15, No. 7. (26 June 2008), pp. 460-467.
    by Ruth M Barrett, Marcelo A Wood
    posted to molecular-signaling molecular-general learning-and-memory by balicea on 2008-07-21 14:37:56 as **
  • Uncertainty, Neuromodulation, and Attention
    Neuron, Vol. 46, No. 4. (19 May 2005), pp. 681-692.
    by Angela J Yu, Peter Dayan
    posted to systems-biology neuro-computation neuro-coding neuro-chem control-theory attention by balicea on 2008-07-20 02:50:21 as ** along with 7 people and 1 group nishiokov fbaroni oamg jmc rchava sbarthelme awooga Glimcher_Lab
  • Natural image statistics for digital image forensics
    (2005)
    by Siwei Lyu
    posted to machine-learning informatics bio-stat applied-math by balicea on 2008-07-18 20:53:40 as ** along with 1 group Dartmouth Computer Science
  • Sharing and reusing gene expression profiling data in neuroscience.
    Neuroinformatics, Vol. 5, No. 3. (2007), pp. 161-175.
    by X Wan, P Pavlidis
    posted to neuro-computation modeling-and-simulation informatics general-interfaces gene-gene gene-expression cell-models by balicea on 2008-07-17 15:13:38 as ** along with 3 people klo jfr hpiwowar
  • The use of logic relationships to model colon cancer gene expression networks with mRNA microarray data.
    Journal of biomedical informatics, Vol. 41, No. 4. (August 2008), pp. 530-543.
    by X Ruan, J Wang, H Li, RE Perozzi, EF Perozzi
    posted to rna networks modeling-and-simulation genome-interactome gene-gene gene-expression diseaseomics cell-models biological-inspired-modeling by balicea on 2008-07-17 15:12:17 as ** along with 1 person jfr
  • Identification of gene interactions associated with disease from gene expression data using synergy networks
    BMC Systems Biology, Vol. 2, No. 1. (2008)
    by John Watkinson, Xiaodong Wang, Tian Zheng, Dimitris Anastassiou
    posted to networks microarray gene-gene gene-expression diseaseomics bio-stat by balicea on 2008-07-17 15:09:58 as ** along with 4 people jfr frohike barriot smgomez
  • PALEONTOLOGY: New Tricks with Old Bones
    Science, Vol. 321, No. 5886. (11 July 2008), pp. 211-212.
    by Rachel Mackelprang, Edward M Rubin
    posted to methods genome-sequencing general-physiology bio-bone by balicea on 2008-07-17 15:08:49 as ** along with 1 person jmeppley
  • Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls
    Nature, Vol. 447, No. 7145. (7 June 2007), pp. 661-678.
    posted to whole-genomic heredity genome-prediction genome-association diseaseomics by balicea on 2008-07-17 05:40:52 as ** along with 22 people and 3 groups mfm11 jandot wenhui ramensky raiyar jyuh jfr yas hpiwowar larios vplagnol frohike qmwwallace joepickrell massivemayhem Garamonfok PredictER hms jo_davies psique caseybrown mcgannd parkinson's disease references Bioinformatics T_lab
  • Sodium channel genes and the evolution of diversity in communication signals of electric fishes: Convergent molecular evolution.
    PNAS USA, Vol. 103, No. 10. (2006), pp. 3675-3680.
    by Zakon
    posted to neuro-mechanics musculoskeletal_systems gene-expression functional-genome evolvability evolutionary-genomics evolution animal-model by balicea on 2008-07-15 05:51:52 as **
  • Superfast Vocal Muscles Control Song Production in Songbirds
    PLoS ONE, Vol. 3, No. 7. (July 2008), e2581.
    by Coen P Elemans, Andrew F Mead, Lawrence C Rome, Franz Goller
    posted to neuro-mechanics musculoskeletal_systems movement-science brain-anatomy behavior animal-model by balicea on 2008-07-15 05:39:27 as **
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