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madreach's library [27 articles]

Recent papers added to madreach's library.
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  • CSMET: Comparative Genomic Motif Detection via Multi-Resolution Phylogenetic Shadowing
    PLoS Comput Biol, Vol. 4, No. 6. (6 June 2008), e1000090.
    by Pradipta Ray, Suyash Shringarpure, Mladen Kolar, Eric P Xing
    posted to motif by madreach on 2008-11-03 15:47:03 as ***** along with 5 people and 1 group xili03 djkt cisevol Stew Ema cis-regulatory-evolution
  • Discovering sequence motifs with arbitrary insertions and deletions.
    PLoS computational biology, Vol. 4, No. 4. (April 2008)
    by MC Frith, NF Saunders, B Kobe, TL Bailey
    posted to motif by madreach on 2008-11-03 15:45:24 as ***** along with 7 people gjuggler Stew dquest cabbagesofdoom neils Ema Evangelia
  • A General Definition and Nomenclature for Alternative Splicing Events
    PLoS Comput Biol, Vol. 4, No. 8. (2008), e1000147.
    by Michael Sammeth, Sylvain Foissac, Roderic Guigó
    posted to alternative_splicing by madreach on 2008-11-03 14:38:52 as ** along with 8 people and 1 group malcook treangen sabahkadri Ema bootsy jm12 brianb wutongbin BenosLab
  • Predicting Human Nucleosome Occupancy from Primary Sequence
    PLoS Comput Biol, Vol. 4, No. 8. (2008), e1000134.
    by Shobhit Gupta, Jonathan Dennis, Robert E Thurman, Robert Kingston, John A Stamatoyannopoulos, William S Noble
    posted to tools_methods by madreach on 2008-11-03 14:28:22 as ** along with 4 people gdb djkt Stew aalibes
  • X inactivation: Pluripotency factors flick the switch
    Nature Reviews Genetics, Vol. 9, No. 11., pp. 817-817.
    by Mary Muers
    posted to x_inactivation sex_chromosome by madreach on 2008-10-30 21:57:43 as **
  • Evolution: Cis dominates but trans is dominant
    Nature Reviews Genetics, Vol. 9, No. 11., pp. 816-816.
    by Patrick Goymer
    posted to regulatory_region_analysis by madreach on 2008-10-30 21:56:29 as **
  • Human genomics: Towards a full picture of genomic variation
    Nature Reviews Genetics, Vol. 9, No. 10., pp. 730-731.
    by Magdalena Skipper
    posted to genomic_variation research_highlight by madreach on 2008-10-30 21:54:17 as **
  • Cancer genomics: More than one way....
    Nature Reviews Genetics, Vol. 9, No. 10., pp. 730-731.
    by Nicola Mccarthy
    posted to research_highlight cancer_genomics by madreach on 2008-10-30 21:52:47 as **
  • MicroRNAS: Making a big impression on the proteome
    Nature Reviews Genetics, Vol. 9, No. 9., pp. 650-651.
    by Elizabeth Neame
    posted to research_highlight micro_rna by madreach on 2008-10-30 21:51:24 as ** along with 1 person reyez
  • Purifying selection of mtDNA and its implications for understanding evolution and mitochondrial disease.
    Nature reviews. Genetics (12 August 2008)
    by James Bruce B Stewart, Christoph Freyer, Joanna L L Elson, Nils-Göran G Larsson
    posted to mitochondria review by madreach on 2008-10-30 21:48:39 as ** along with 2 people dchughes bpcusack
  • Integrated detection and population-genetic analysis of SNPs and copy number variation.
    Nature genetics (7 September 2008)
    by Steven A A McCarroll, Finny G G Kuruvilla, Joshua M M Korn, Simon Cawley, James Nemesh, Alec Wysoker, Michael H H Shapero, Paul I W I de Bakker, Julian B B Maller, Andrew Kirby, Amanda L L Elliott, Melissa Parkin, Earl Hubbell, Teresa Webster, Rui Mei, James Veitch, Patrick J J Collins, Robert Handsaker, Steve Lincoln, Marcia Nizzari, John Blume, Keith W W Jones, Rich Rava, Mark J J Daly, Stacey B B Gabriel, David Altshuler
    posted to genomic_variation snp population_genetics by madreach on 2008-10-30 21:47:19 as ** along with 14 people and 1 group Hans45 pdexheimer waszak caseybrown rsantana Zephyrus psique jbsaltz Ema misonneh djkt daed rdiaz guhjy Roswell Cancer Crosstalk
  • Role of Duplicate Genes in Robustness against Deleterious Human Mutations
    PLoS Genet, Vol. 4, No. 3. (14 March 2008), e1000014.
    by Tzu-Lin Hsiao, Dennis Vitkup
    posted to duplicate_genes by madreach on 2008-10-30 21:38:09 as *****
  • Analysis of chimpanzee history based on genome sequence alignments.
    PLoS genetics, Vol. 4, No. 4. (April 2008)
    by JL Caswell, S Mallick, DJ Richter, J Neubauer, C Schirmer, S Gnerre, D Reich
    posted to population_genetics adaptation by madreach on 2008-10-30 21:36:31 as ** along with 2 people aprasad reyez
  • The impact of recombination on nucleotide substitutions in the human genome.
    PLoS genetics, Vol. 4, No. 5. (May 2008)
    by L Duret, PF Arndt
    posted to genetic_landscape adaptation by madreach on 2008-10-30 21:35:03 as ** along with 4 people PetrovLab aprasad gjuggler balicea
  • Assessing the Evolutionary Impact of Amino Acid Mutations in the Human Genome
    PLoS Genet, Vol. 4, No. 5. (30 May 2008), e1000083.
    by Adam R Boyko, Scott H Williamson, Amit R Indap, Jeremiah D Degenhardt, Ryan D Hernandez, Kirk E Lohmueller, Mark D Adams, Steffen Schmidt, John J Sninsky, Shamil R Sunyaev, Thomas J White, Rasmus Nielsen, Andrew G Clark, Carlos D Bustamante
    posted to adaptation by madreach on 2008-10-30 21:32:55 as ** along with 3 people and 1 group Zephyrus bpcusack aprasad R.E.A.D
  • An Evolutionarily Conserved Sexual Signature in the Primate Brain
    PLoS Genet, Vol. 4, No. 6. (20 June 2008), e1000100.
    by Björn Reinius, Peter Saetre, Jennifer A Leonard, Ran Blekhman, Roxana Merino-Martinez, Yoav Gilad, Elena Jazin
    posted to sex_chromosome adaptation by madreach on 2008-10-30 21:32:05 as ** along with 2 people djkt kambiz
  • The status of dosage compensation in the multiple X chromosomes of the platypus.
    PLoS genetics, Vol. 4, No. 7. (July 2008)
    by JE Deakin, TA Hore, E Koina, JA Marshall Graves
    posted to sex_chromosome by madreach on 2008-10-30 21:30:32 as ** along with 1 person cjhall
  • The Insulator Binding Protein CTCF Positions 20 Nucleosomes around Its Binding Sites across the Human Genome
    PLoS Genet, Vol. 4, No. 7. (25 July 2008), e1000138.
    by Yutao Fu, Manisha Sinha, Craig L Peterson, Zhiping Weng
    posted to epigenetics by madreach on 2008-10-30 21:29:46 as ** along with 5 people and 2 groups polivares cisevol djkt clearbluespring inesdesantiago JacksonLab BergmanLab
  • Patterns of Positive Selection in Six Mammalian Genomes
    PLoS Genet, Vol. 4, No. 8. (2008), e1000144.
    by Carolin Kosiol, Tomáš Vinař, Rute R da Fonseca, Melissa J Hubisz, Carlos D Bustamante, Rasmus Nielsen, Adam Siepel
    posted to adaptation by madreach on 2008-10-30 21:26:50 as read along with 6 people skembel bpcusack gjuggler cabbagesofdoom djkt hdopazo
  • Genetic Variation in an Individual Human Exome
    PLoS Genet, Vol. 4, No. 8. (2008), e1000160.
    by Pauline C Ng, Samuel Levy, Jiaqi Huang, Timothy B Stockwell, Brian P Walenz, Kelvin Li, Nelson Axelrod, Dana A Busam, Robert L Strausberg, Craig J Venter
    posted to interesting by madreach on 2008-10-30 21:25:57 as ** along with 8 people xingxu misonneh djkt bpcusack caseybrown Ema guhjy reyez
  • Selective Constraints in Experimentally Defined Primate Regulatory Regions
    PLoS Genet, Vol. 4, No. 8. (2008), e1000157.
    by Daniel J Gaffney, Ran Blekhman, Jacek Majewski
    posted to regulatory_region_analysis by madreach on 2008-10-30 21:24:31 as ** along with 9 people and 2 groups xianjun alhufton djkt bpcusack aprasad pradiptaray caseybrown maximilianh cisevol BergmanLab cis-regulatory-evolution
  • A Catalog of Neutral and Deleterious Polymorphism in Yeast
    PLoS Genet, Vol. 4, No. 8. (2008), e1000183.
    by Scott W Doniger, Hyun S Kim, Devjanee Swain, Daniella Corcuera, Morgan Williams, Shiaw-Pyng Yang, Justin C Fay
    posted to adaptation by madreach on 2008-10-30 21:23:04 as ** along with 6 people and 1 group GustavoLacerda druvus stajich emptyhb bpcusack caseybrown Berkeley Mycology
  • Analysis of Transposon Interruptions Suggests Selection for L1 Elements on the X Chromosome
    PLoS Genet, Vol. 4, No. 8. (2008), e1000172.
    by György Abrusán, Joti Giordano, Peter E Warburton
    posted to transposable_elements by madreach on 2008-10-30 21:20:12 as **
  • The Evolution of Epigenetic Regulators CTCF and BORIS/CTCFL in Amniotes
    PLoS Genet, Vol. 4, No. 8. (2008), e1000169.
    by Timothy A Hore, Janine E Deakin, Marshall
    posted to epigenetics by madreach on 2008-10-30 18:15:12 as **
  • Is Mate Choice in Humans MHC-Dependent?
    PLoS Genet, Vol. 4, No. 9. (2008), e1000184.
    by Raphaëlle Chaix, Chen Cao, Peter Donnelly
    posted to interesting by madreach on 2008-10-30 18:14:02 as ** along with 5 people and 1 group Zephyrus xingxu jbsaltz timblog djkt R.E.A.D
  • Sex-Biased Evolutionary Forces Shape Genomic Patterns of Human Diversity
    PLoS Genet, Vol. 4, No. 9. (2008), e1000202.
    by Michael F Hammer, Fernando L Mendez, Murray P Cox, August E Woerner, Jeffrey D Wall
    posted to sex_chromosome by madreach on 2008-10-30 18:11:14 as *** along with 3 people and 1 group Zephyrus xingxu djkt R.E.A.D
  • A Position Effect on the Heritability of Epigenetic Silencing
    PLoS Genet, Vol. 4, No. 10. (10 October 2008), e1000216.
    by Jaswinder Singh, Michael Freeling, Damon Lisch
    posted to epigenetics by madreach on 2008-10-30 18:07:48 as *** along with 4 people epigenetics jiayi369 inesdesantiago djkt
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