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neils's bacteria [24 articles]

Recent papers added to neils's library classified by the tag bacteria. You can also see everyone's bacteria.
  • Protein secretion and outer membrane assembly in Alphaproteobacteria
    FEMS Microbiology Reviews, Vol. 9999, No. 9999. (2008)
    by Xenia Gatsos, Andrew J Perry, Khatira Anwari, Pavel Dolezal, Peter P Wolynec, Vladimir A Liki0107, Anthony W Purcell, Susan K Buchanan, Trevor Lithgow
    posted to secretion membrane beta-barrel bacteria alphaproteobacteria by neils on 2008-09-05 05:45:46 as **
  • Complete genome of Phenylobacterium zucineum - a novel facultative intracellular bacterium isolated from human erythroleukemia cell line K562
    BMC Genomics, Vol. 9 (13 August 2008), 386.
    by Yingfeng Luo, Xiaoli Xu, Zonghui Ding, Zhen Liu, Bing Zhang, Zhiyu Yan, Jie Sun, Songnian Hu, Xun Hu
    posted to bacteria genome phenylobacterium symbiosis by neils on 2008-08-17 08:00:31 as **
  • The cis-regulatory map of Shewanella genomes
    Nucl. Acids Res. (13 August 2008), gkn515.
    by Jiajian Liu, Xing Xu, Gary D Stormo
    posted to bacteria genomics regulation shewanella by neils on 2008-08-14 08:37:37 as **
  • Survey of group I and group II introns in 29 sequenced genomes of the Bacillus cereus group: insights into their spread and evolution
    Nucl. Acids Res., Vol. 36, No. 14. (1 August 2008), pp. 4529-4548.
    by Nicolas J Tourasse, Anne-Brit Kolsto
    posted to bacillus bacteria evolution genomics introns by neils on 2008-08-08 02:10:27 as **
  • Large scale variation in Enterococcus faecalis illustrated by the genome analysis of strain OG1RF
    Genome Biology, Vol. 9, No. 7. (2008)
    by Agathe Bourgogne, Danielle Garsin, Xiang Qin, Kavindra Singh, Jouko Sillanpaa, Shailaja Yerrapragada, Yan Ding, Shannon D Rocha, Christian Buhay, Hua Shen, Guan Chen, Gabrielle Williams, Donna Muzny, Arash Maadani, Kristina Fox, Jason Gioia, Lei Chen, Yue Shang, Cesar Arias, Sreedhar Nallapareddy, Meng Zhao, Vittal Prakash, Shahreen Chowdhury, Huaiyang Jiang, Richard Gibbs, Barbara Murray, Sarah Highlander, George Weinstock
    posted to bacteria enterococcus genomics pathogen virulence by neils on 2008-07-09 03:42:20 as **
  • The ORFeome of Staphylococcus aureus v 1.1
    BMC Genomics, Vol. 9, No. 1. (2008)
    by Christina Brandner, Richard Maier, Daryl Henderson, Helmut Hintner, Johann Bauer, Kamil Onder
  • A General System for Studying Protein-Protein Interactions in Gram-Negative Bacteria
    J. Proteome Res. (1 July 2008)
    by Dale A Pelletier, Gregory B Hurst, Linda J Foote, Patricia K Lankford, Catherine K Mckeown, Tse-Yuan Lu, Denise D Schmoyer, Manesh B Shah, Judson W Hervey, Hayes W Mcdonald, Brian S Hooker, William R Cannon, Don S Daly, Jason M Gilmore, Steven H Wiley, Deanna L Auberry, Yisong Wang, Frank W Larimer, Stephen J Kennel, Mitchel J Doktycz, Jennifer L Morrell-Falvey, Elizabeth T Owens, Michelle V Buchanan
  • The topology of the bacterial co-conserved protein network and its implications for predicting protein function
    BMC Genomics, Vol. 9, No. 1. (2008)
    by Anis K Fard, Sonia Leach, Lawrence Hunter, Ryan Gill
    posted to bacteria interaction network protein-protein topology by neils on 2008-07-01 00:32:28 as **
  • Isolation of microbes from Lake Vostok accretion ice.
    Applied and environmental microbiology (13 June 2008)
    by Tom D'Elia, Ram Veerapaneni, Scott O O Rogers
    posted to antarctic bacteria culture isolation lake-vostok psychrophily by neils on 2008-06-18 00:59:43 as **
  • Rewiring the Specificity of Two-Component Signal Transduction Systems
    Cell, Vol. 133 (2008), pp. 1043-1054.
    by Jeffrey M Skerker, Barrett S Perchuk, Albert Siryaporn, Emma A Lubin, Orr Ashenberg, Mark Goulian, Michael T Laub
  • Large-scale analysis of gene clustering in bacteria
    Genome Res., Vol. 18, No. 6. (1 June 2008), pp. 949-956.
    by Qingwu Yang, Sing-Hoi Sze
    posted to bacteria bioinformatics clustering genetics operon prediction by neils on 2008-06-03 02:29:35 as **
  • Eukaryotic and bacterial gene clusters related to an alternative pathway of non-phosphorylated L-rhamnose metabolism.
    The Journal of biological chemistry (27 May 2008)
    by Seiya Watanabe, Masayuki Saimura, Keisuke Makino
    posted to bacteria cluster eukarya gene genomics metabolism pathway by neils on 2008-05-30 00:36:46 as **
  • Biocomputational prediction of small non-coding RNAs in Streptomyces
    BMC Genomics, Vol. 9, No. 1. (2008)
    by Josef Panek, Jan Bobek, Karel Mikulik, Marek Basler, Jiri Vohradsky
    posted to bacteria bioinformatics ncrna prediction streptomyces by neils on 2008-05-13 13:09:48 as **
  • From the Cover: Extreme polyploidy in a large bacterium
    Proceedings of the National Academy of Sciences, Vol. 105, No. 18. (6 May 2008), pp. 6730-6734.
    by Jennifer E Mendell, Kendall D Clements, Howard J Choat, Esther R Angert
  • Genomics of an extreme psychrophile, Psychromonas ingrahamii
    BMC Genomics, Vol. 9, No. 1. (2008)
    by Monica Riley, James Staley, Antoine Danchin, Tingzhang Wang, Thomas Brettin, Loren Hauser, Miriam Land, Linda Thompson
    posted to bacteria genome genomics psychromonas psychrophily by neils on 2008-05-06 15:00:02 as **
  • Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS
    Nature, Vol. 453, No. 7191., pp. 124-127.
    by Raz Zarivach, Wanyin Deng, Marija Vuckovic, Heather B Felise, Hai V Nguyen, Samuel I Miller, Brett B Finlay, Natalie CJ Strynadka
  • Genome-wide subcellular localization of putative outer membrane and extracellular proteins in Leptospira interrogans serovar Lai genome using bioinformatics approaches
    BMC Genomics, Vol. 9, No. 1. (2008)
    by Wasna Viratyosin, Supawadee Ingsriswang, Eakasit Pacharawongsakda, Prasit Palittapongarnpim
  • Evolvability and hierarchy in rewired bacterial gene networks
    Nature, Vol. 452, No. 7189. (17 April 2008), pp. 840-845.
    by Mark Isalan, Caroline Lemerle, Konstantinos Michalodimitrakis, Carsten Horn, Pedro Beltrao, Emanuele Raineri, Mireia Garriga-Canut, Luis Serrano
  • Large-Scale Analysis of Gene Clustering in Bacteria
    Genome Res. (2008)
    by Qingwu Yang, Sing H Sze
    posted to bacteria bioinformatics clustering genomics operon by neils on 2008-04-05 02:38:06 as **
  • De novo bacterial genome sequencing: Millions of very short reads assembled on a desktop computer
    Genome Res. (2008)
    by David Hernandez, Patrice Francois, Laurent Farinelli, Magne Osteras, Jacques Schrenzel
    posted to assembly bacteria genome illumina sequencing software by neils on 2008-04-04 03:39:24 as **
  • LocateP: Genome-scale subcellular-location predictor for bacterial proteins
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Miaomiao Zhou, Jos Boekhorst, Christof Francke, Roland Siezen
    posted to bioinformatics genomics localisation prediction scl subcellular bacteria by neils on 2008-03-27 23:16:35 as **
  • Identification of two eukaryote-like serine/threonine kinases encoded by Chlamydia trachomatis serovar L2 and characterization of interacting partners of Pkn1.
    Infect Immun, Vol. 71, No. 10. (October 2003), pp. 5772-5784.
    by A Verma, AT Maurelli
    posted to chlamydia phosphorylation pkn1 prokaryotic bacteria kinase by neils on 2008-01-08 02:43:31 as **
  • Ser/Thr/Tyr protein phosphorylation in bacteria - for long time neglected, now well established.
    J Mol Microbiol Biotechnol, Vol. 9, No. 3-4. (2005), pp. 125-131.
    by J Deutscher, MH Saier
    posted to phosphorylation bacteria kinase by neils on 2008-01-07 03:40:22 as **
  • Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.
    J Mol Biol, Vol. 305, No. 3. (Jan 2001), pp. 567-580.
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